prot_C-tenellus_contig834.6.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig834.6.1
Unique Nameprot_C-tenellus_contig834.6.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length237
Homology
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: D7G6E6_ECTSI (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E6_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 9.160e-111
Identity = 173/237 (73.00%), Postives = 202/237 (85.23%), Query Frame = 0
Query:    1 MAVIVSAQLVNLTDKSELKLVEAVASLLPSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAPIVSFTEQ 237
            MA+ VSAQLVNL+ K+ELKLVEAVA  +PSG+A+F+KAC+ LI  ANAP+LIRK+L QRN IL M +T+DVEGCFGILFSLL KTDNPK A+PALSMEI+  +LE VD  A LRLKLVTNLYNMLPV +A QL+VL+ +IRYA  AKL  MLS+FF   D+WIKGW+LSV DQRRLYLLIS+TLG EGK VESQKFLMKYL T+DGA+  EL++VKAAAV+GCIGAVK+PIVSFTEQ
Sbjct:    1 MAMAVSAQLVNLSAKAELKLVEAVAKAMPSGQAQFSKACTALITNANAPDLIRKVLEQRNVILEMSKTDDVEGCFGILFSLLFKTDNPKAAVPALSMEIATKVLEKVDDRAPLRLKLVTNLYNMLPVRTAGQLEVLLLVIRYAKEAKLVAMLSSFFAGVDDWIKGWELSVADQRRLYLLISDTLGSEGKAVESQKFLMKYLATYDGATTAELAEVKAAAVRGCIGAVKSPIVSFTEQ 237          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A835Z3J7_9STRA (Eukaryotic translation initiation factor 3 subunit M n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.740e-59
Identity = 115/238 (48.32%), Postives = 154/238 (64.71%), Query Frame = 0
Query:    5 VSAQLVNLTDKSELKLVEAVASLL--PSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTFDG---ASAEELSQVKAAAVKGCIGAVKAPIVSFTEQ 237
            VSAQLVNL  ++ +KLV AVA+ L  P+ +  F   CS LI EANA ELIRKLLG R  +L  ++ E +EGCF +LF LLH+  +P   MP L  E++  +L+  D  A LRL+L T+LYNMLP  ++ Q +VL+++I+YA    L  ML++FF   +  +  W LS+ DQRRL+LL+++ L        SQ FLMKYLVTFD     S     +V+AAA +G +GAVKAPIVSF E 
Sbjct:    3 VSAQLVNLGPEAPVKLVGAVAAALKDPAEQNAFRTECSKLINEANAAELIRKLLGHRQVMLSFDKEETIEGCFAVLFHLLHRLPDPAKNMPVLVPEVTAALLDSED-KAGLRLRLATSLYNMLPAKTSVQFEVLLAIIKYAASTGLLAMLNSFFASMESMLAAWQLSLKDQRRLFLLVADVLSKASDAAGSQVFLMKYLVTFDNDAEGSKTSAKEVRAAAARGAVGAVKAPIVSFMEH 239          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A8K0H384_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H384_9ROSA)

HSP 1 Score: 87.8 bits (216), Expect = 1.770e-16
Identity = 60/182 (32.97%), Postives = 98/182 (53.85%), Query Frame = 0
Query:   50 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            +L   +L     I      +D+E  F ++ +++ K+++P  A+    + IS  I +  +   ALRLK++ NLYN+L     S+  V +  +  A   K+T  +   FT  D ++K W++ + DQR+L+L IS+ L + +    +S KFL KYL+TF G  A  LS+ K  AV   +  VKAP
Sbjct:   55 DLASLMLTSAEVIFSKVAEKDLECIFTVICNVVTKSESPDEALEMAKL-ISAKITQQPNDKPALRLKILFNLYNLLEN-PYSRFYVYMKTLNLAIDGKVTEHIIPSFTKIDSFLKEWNIGIVDQRKLFLAISDVLKENKSAPKDSFKFLTKYLMTFSGDDAHNLSEAKEEAVHTIVEFVKAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A7S2UX52_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX52_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 9.980e-16
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 0
Query:  142 YAHVAKLTGMLSTFFTC-ADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTF-DGASAEELSQVKAAAVKGCIGAVKAPIVSFTE 236
            +A  +   G+LS+FF     EW++ +DL   DQR LYLL++++L       E+QKFL+KYL T+ D A A+ LS VK  A +G +GA++ PIVSFTE
Sbjct:    1 FAMASSQNGLLSSFFIKQGQEWVELFDLETGDQRTLYLLMADSLVQSQHSHEAQKFLLKYLATYEDEADAKALSAVKEHAARGAVGAIRFPIVSFTE 97          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: UPI001CB957E6 (eukaryotic translation initiation factor 3 subunit M-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB957E6)

HSP 1 Score: 84.0 bits (206), Expect = 4.030e-15
Identity = 58/184 (31.52%), Postives = 93/184 (50.54%), Query Frame = 0
Query:   50 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNML--PVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            +L   ++   + ++     +D+E  F ++ +L+ K ++    +    + +S  I++      ALRLK++ NLYN+L  P C   +  V +  ++ A   K+T  +   F   D ++K WDL VHDQR LYL IS  L + +    E  KFL KYL TF G  A  + + K  A    I  +KAP
Sbjct:   55 DLASLMITSADLLVSKASDKDLECIFTVICNLVKKPESTDEILEMAKL-LSTKIVQQPTDKPALRLKILFNLYNLLENPYC---RFYVYMGALKLAIDGKVTEHIIPSFKKIDSFLKEWDLGVHDQRELYLAISNVLKEHKSSPKEILKFLSKYLATFSGEDAHVMEEAKEEAAHAIIEFIKAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: D7SVA4_VITVI (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Vitis TaxID=3603 RepID=D7SVA4_VITVI)

HSP 1 Score: 83.2 bits (204), Expect = 7.510e-15
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 0
Query:   50 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDE---GKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            +L   +L   + +      +D+E  F ++ +L+ K+++P  A+  ++  IS  I +  +  AALRLK++ NLYN+L     S+  V +  +  A   K+T  +   F   D ++K W++ + DQR LYL IS  L +    GKD    KFL KYL TF G  A  +S+ K  AV+  +  V+AP
Sbjct:   55 DLASLMLTSADLMFSKASDKDLECIFTVICNLVTKSESPDEALE-MAKFISAKITQQPNDKAALRLKILFNLYNLLEN-PYSRFYVYMKALNLAVNGKVTEHIIPSFKMMDSFLKEWNIGILDQRALYLNISNILKENKSLGKDYF--KFLTKYLATFSGEDAYTMSEAKEEAVRTIMEFVRAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A7S3DAN4_9EUKA (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DAN4_9EUKA)

HSP 1 Score: 81.6 bits (200), Expect = 2.710e-14
Identity = 52/172 (30.23%), Postives = 91/172 (52.91%), Query Frame = 0
Query:   64 GMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAAL---RLKLVTNLYNML--PVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            G + + ++E  F I+  +L      +VA          N++EV+  +  L   R +++ + YN +  P+  + +  V V+L+R+A   KL   ++   + AD W+K W  S  D R++YL ISE L +E +   + KFL+KYL T++G+ + EL +VK  A    + A+  P
Sbjct:   83 GNKTSGEIESMFTIVIDMLAAVKADEVAAKL------DNVIEVLSLNHNLPETRFRILVSTYNSIDEPLPLSLRARVFVALVRFAASNKLLVSIANQLSNADAWVKEWQCSAEDIRKVYLTISEALAEEKQKALAHKFLVKYLNTYEGSESAELGEVKELAADAIVEAISLP 248          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A0K9QZ29_SPIOL (Eukaryotic translation initiation factor 3 subunit M n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9QZ29_SPIOL)

HSP 1 Score: 77.4 bits (189), Expect = 7.760e-13
Identity = 57/216 (26.39%), Postives = 104/216 (48.15%), Query Frame = 0
Query:   16 SELKLVEAVASLLPSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            SEL   +A   +  +  A  ++   + +A     +L   +L   + +      +D E  + ++ +L+ K++NP+  +  + + IS  I++  +    LRLK++ NLYN+L   + S+  V ++++  A   K+T  +       D ++  W+LSV DQR L+L +   L + +    ES  FL KYL TF     + + + K  A    I  VK P
Sbjct:   21 SELAWADAGTEVAQAQVARSSQEAQECMAMERWIDLASLILTSADLVFSKVAEKDTECIYTVICNLVTKSENPEEVLEIVKL-ISAKIVQHPNEKPTLRLKILFNLYNLLED-AYSRFHVYLNVLNLAASGKVTEHVIPSIKKIDSFLSEWNLSVQDQRELFLAVFNALKESKSSGKESFNFLSKYLATFSPEDEQAMIEAKEEAANAIIEFVKGP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A2J6KR62_LACSA (Eukaryotic translation initiation factor 3 subunit M n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KR62_LACSA)

HSP 1 Score: 75.9 bits (185), Expect = 2.650e-12
Identity = 56/182 (30.77%), Postives = 92/182 (50.55%), Query Frame = 0
Query:   50 ELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDV-ESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            +L   ++   + +      +D+E  F ++ +L+ K ++   ++  +S  IS  I +  +   +LRLK++ NLYNML       L V +  +  A   K+   +   F   D  +K W+L +HDQR+L+L IS  L +      E+ KFL KYL TF G  A ++++ K  A    I  VKAP
Sbjct:   55 DLASLMITSADLVFSKASEKDLECIFTVICNLVKKPESLDESLE-ISKLISTKIAQQPNEKPSLRLKILFNLYNMLENPYGRFL-VYMKALEVAANGKVMDHIIPSFKNTDTLLKEWNLGLHDQRQLFLAISNILKEHKSSTKENLKFLTKYLATFSGDDAHDINEAKEEAAYTIIEFVKAP 234          
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Match: A0A2J6LV32_LACSA (Eukaryotic translation initiation factor 3 subunit M n=4 Tax=Lactuca TaxID=4235 RepID=A0A2J6LV32_LACSA)

HSP 1 Score: 73.6 bits (179), Expect = 1.550e-11
Identity = 59/216 (27.31%), Postives = 101/216 (46.76%), Query Frame = 0
Query:   16 SELKLVEAVASLLPSGKAEFTKACSDLIAEANAPELIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEISGNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTGMLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGD-EGKDVESQKFLMKYLVTFDGASAEELSQVKAAAVKGCIGAVKAP 230
            +E+   EA   +     A       D +      +L   +L   + +      +D+E  F I+ +L+ K ++    M  ++  +S  + +  +   A+RLK++ NLYN+L     S+  V ++ ++ A   K+   +   F   D ++K W+L VHDQR L+L IS  L + +    E+ KFL KYL TF    A  + + K  A    I  VK+P
Sbjct:   21 AEMSWAEAGPEVAEPQVASLCLEAQDCMIAGRWFDLASLMLTSADLVFPKASDKDLECIFTIICNLVKKPESLD-EMLEMAKLLSTKVAQQPNDKPAIRLKILFNLYNLLEN-PYSRFYVYMNALKLAMNGKVIEHIIPSFKKIDSFLKEWNLGVHDQRELFLTISNILKEHKSSPKETFKFLTKYLATFSDEDAHTMEEAKEEAAYTIIEFVKSP 234          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig834.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G6E6_ECTSI9.160e-11173.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A835Z3J7_9STRA1.740e-5948.32Eukaryotic translation initiation factor 3 subunit... [more]
A0A8K0H384_9ROSA1.770e-1632.97Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A7S2UX52_9STRA9.980e-1646.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI001CB957E64.030e-1531.52eukaryotic translation initiation factor 3 subunit... [more]
D7SVA4_VITVI7.510e-1533.15Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3DAN4_9EUKA2.710e-1430.23Eukaryotic translation initiation factor 3 subunit... [more]
A0A0K9QZ29_SPIOL7.760e-1326.39Eukaryotic translation initiation factor 3 subunit... [more]
A0A2J6KR62_LACSA2.650e-1230.77Eukaryotic translation initiation factor 3 subunit... [more]
A0A2J6LV32_LACSA1.550e-1127.31Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15350:SF2EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Mcoord: 46..232
NoneNo IPR availablePANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 46..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig834contigC-tenellus_contig834:13092..16048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig834.6.1mRNA_C-tenellus_contig834.6.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig834 13092..16048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig834.6.1 ID=prot_C-tenellus_contig834.6.1|Name=mRNA_C-tenellus_contig834.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=237bp
MAVIVSAQLVNLTDKSELKLVEAVASLLPSGKAEFTKACSDLIAEANAPE
LIRKLLGQRNAILGMERTEDVEGCFGILFSLLHKTDNPKVAMPALSMEIS
GNILEVVDGHAALRLKLVTNLYNMLPVCSASQLDVLVSLIRYAHVAKLTG
MLSTFFTCADEWIKGWDLSVHDQRRLYLLISETLGDEGKDVESQKFLMKY
LVTFDGASAEELSQVKAAAVKGCIGAVKAPIVSFTEQ
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