prot_C-tenellus_contig8332.2.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig8332.2.2
Unique Name	prot_C-tenellus_contig8332.2.2
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	269

Homology

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BLAST of mRNA_C-tenellus_contig8332.2.2 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.670e-19
Identity = 94/260 (36.15%), Postives = 113/260 (43.46%), Query Frame = 0

Query:    1 MRRTPARPGGQGKKPSGSSFKITYSVSQLLTMGKAEQXXXXXXXXXXXXXXXXXXXXXQXDDGGKGGGEEEKSDVLEGWQKFGYSNISPLLPEDGSHAPPAHKLKEAMQNLKLRPGSARDFHADYLAALAEAGPGNGDLAAQAQRGTRSTLALTGGARGGLDRCVGRGDRDRGVQGRYDXXXXXXHA-------ENDRVGG------------------------------GRGGAGAPSRGPSRWDALRPDRERDRGYN 223
            MRR P R G  GKK SG+ FKITYSV+QLL+MGK                                   E      EGW K+ Y  I PL+ E+ +  P     KE    LK++PGSARD H++++AAL             A++G     + + G RGG D    R DRDRG      XXXXXX         + DR G                               G GGAG   R PSRWDAL+PDRERDRGYN
Sbjct:    2 MRRPPTRAGLGGKKASGTGFKITYSVNQLLSMGKELME------------------------------SEAGCPPPEGWDKYEYDTIGPLIDENNTRIP----SKEEAAALKMKPGSARDLHSEHIAALV------------AKQGADPDQSPSLGPRGGGD----RPDRDRGXXXXXXXXXXXXXXXWGDRDRDWDRFGDRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGGAGG-GRAPSRWDALKPDRERDRGYN 210

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig8332.2.2 vs. uniprot

BLAST of mRNA_C-tenellus_contig8332.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8Y0_ECTSI	1.670e-19	36.15	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 36..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig8332	contig	C-tenellus_contig8332:2068..5827 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig8332.2.2	mRNA_C-tenellus_contig8332.2.2	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig8332 1928..5827 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig8332.2.2 ID=prot_C-tenellus_contig8332.2.2|Name=mRNA_C-tenellus_contig8332.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=269bp
MRRTPARPGGQGKKPSGSSFKITYSVSQLLTMGKAEQAERAEKAKKSEKI
ENTENNETQEDDGGKGGGEEEKSDVLEGWQKFGYSNISPLLPEDGSHAPP
AHKLKEAMQNLKLRPGSARDFHADYLAALAEAGPGNGDLAAQAQRGTRST
LALTGGARGGLDRCVGRGDRDRGVQGRYDRGDRDRHAENDRVGGGRGGAG
APSRGPSRWDALRPDRERDRGYNNRTNRERDVDGVGGGNGREGGAGGRHG
GRNGRERGDRGGHEESGGG