prot_C-tenellus_contig8320.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8320.3.1
Unique Nameprot_C-tenellus_contig8320.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length367
Homology
BLAST of mRNA_C-tenellus_contig8320.3.1 vs. uniprot
Match: A0A6H5LEA1_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA1_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 5.010e-91
Identity = 167/296 (56.42%), Postives = 207/296 (69.93%), Query Frame = 0
Query:   86 AHPSTE-LPKSNPDMEASKGLNVDGARTILEELLDRCKEATRSKGAMESSHTGSSEWAGFRTTPELLQGVSSTLARIFSRSRRSDGTALCWSWLTLAPQPSRIEIAS--DPRFSIFVTVLPAGNGSPPSHRPIFGSQIMSRVLSGEVEQVKANSQRIIGRSHHSTETPVWSSYGGGVRRLVNEGFQPAVVLEVVFYDWSRGSGYIGGYAAM-PSGSGNAERLLD----GQNEASG-GSTGTGES---EQGRLLILS--TSPCDPHLLLRDGDIYEEEEEGEGGETGEDLILVRRDG 367
            AH + E +P S          + +G  T+L+ELL+RC EAT+S  A ESSHTGSSEWAGF+T P LL+GV + L+R   RSR SDG+AL WSWLTL+P+P R+ +A+  D R  +++TVLPAGNG+PPSHRP++G  I+SRVL+GEVEQVK+NS+R+IGRS HS ETPVWSS+GGG RRL+NE FQPAV+LEVV YDWSRGSGY G YAA   S SG+AE   +    G+ EA+G    G GES   E G L I++  + PC P LL RDGD+YEE            L LVR DG
Sbjct:  102 AHKTEEGVPSSTTTAGGRSVPDGEGELTLLDELLERCAEATKSDAAAESSHTGSSEWAGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGNPPSHRPMYGCHILSRVLAGEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGYSGSYAAPGTSSSGSAELRAEAEGVGRAEAAGVEGDGGGESSPAENGILPIVAMDSCPCPPALLFRDGDVYEEXXXXXXXXXX--LTLVRSDG 395          
BLAST of mRNA_C-tenellus_contig8320.3.1 vs. uniprot
Match: A0A836CBN6_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.830e-38
Identity = 100/257 (38.91%), Postives = 133/257 (51.75%), Query Frame = 0
Query:  113 ILEELLDRCKEATRSKGAMESSH--TGSSEWAGFRTTPELLQGVSSTLARIFSRSRRSDGTALCWSWLTLAPQPSRIEIASDPRFSIFVTVLPAGNGSPPSHRPIFGSQIMSRVLSGEVEQVKANSQRIIGRSHHSTETPVWSSYGGGVRRLVNEGFQPAVVLEVVFYDWSRGSGYIGGYAAMPSGSGNAERLLDGQNEASGGSTGTGESEQGRLLILSTSPCDPHLLLRDGDIYEEEEEGEGGETGEDLILVRRDG 367
            +  +LL  C+ A       E +   +GSSEW+GF T    LQ V  +L +     R   G +L WSWL L+  P R+ +     F + +TVLP G   PP+HRP+ G+ ++S V  G+VEQVKAN QRII R+ H+ ETP+W+S+GGGVRRL N     A +LEV+FY   RG      Y       G AER  +       G           +  LS  PCDP +L R        EEG G E GE L++  R+G
Sbjct:   98 VFHQLLQDCQTAADYAATAEPADAGSGSSEWSGFWTAEPKLQQVLDSLQQCSPAWRGGRGASLAWSWLGLSTMPLRVMLHQGGGFGVLLTVLPPG-AKPPAHRPMIGAHMLSIVCQGDVEQVKANGQRIINRTRHTPETPIWNSFGGGVRRLANMSVTTAYILEVLFYG-KRGPPE---YDTRAPDGGAAERNAEADEFILSGPRA--------MATLSAPPCDPEVLFRSVG-----EEG-GDEGGEVLVIRGREG 335          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8320.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LEA1_9PHAE5.010e-9156.42Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CBN6_9STRA4.830e-3838.91Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..367
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8320contigC-tenellus_contig8320:2237..4296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8320.3.1mRNA_C-tenellus_contig8320.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8320 2183..4296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8320.3.1 ID=prot_C-tenellus_contig8320.3.1|Name=mRNA_C-tenellus_contig8320.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=367bp
MYCVISARGSSRNRQTAEIMGISLALGISVFILALCPGVGFAPHVTTGTV
ITAAKASQKLRADHYGRQLLKHQCQEYTERWFRLRAHPSTELPKSNPDME
ASKGLNVDGARTILEELLDRCKEATRSKGAMESSHTGSSEWAGFRTTPEL
LQGVSSTLARIFSRSRRSDGTALCWSWLTLAPQPSRIEIASDPRFSIFVT
VLPAGNGSPPSHRPIFGSQIMSRVLSGEVEQVKANSQRIIGRSHHSTETP
VWSSYGGGVRRLVNEGFQPAVVLEVVFYDWSRGSGYIGGYAAMPSGSGNA
ERLLDGQNEASGGSTGTGESEQGRLLILSTSPCDPHLLLRDGDIYEEEEE
GEGGETGEDLILVRRDG
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