prot_C-tenellus_contig8316.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8316.4.1
Unique Nameprot_C-tenellus_contig8316.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length424
Homology
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BLAST of mRNA_C-tenellus_contig8316.4.1 vs. uniprot
Match: D8LS70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS70_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 6.500e-14
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:  292 GRVDWTQVGKGAAGFVLGFACFTVQGSDWARASYYLWHSAWHVLAMGSTLPLIRARRWG 350
            G +DW Q+G G AGF  G  CF VQG+      Y+LWH AWHVLAMGS +P++RARRWG
Sbjct: 1104 GLLDWRQLGLGVAGFAAGLTCFAVQGTSATAGWYHLWHGAWHVLAMGSAVPILRARRWG 1162
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BLAST of mRNA_C-tenellus_contig8316.4.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 7.100e-14
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:  292 GRVDWTQVGKGAAGFVLGFACFTVQGSDWARASYYLWHSAWHVLAMGSTLPLIRARRWG 350
            G +DW Q+G G AGF  G  CF VQG+      Y+LWH AWHVLAMGS +P++RARRWG
Sbjct: 1687 GLLDWRQLGLGVAGFAAGLTCFAVQGTSATAGWYHLWHGAWHVLAMGSAVPILRARRWG 1745
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8316.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS70_ECTSI6.500e-1459.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJD0_9PHAE7.100e-1459.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..423
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..423
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 161..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8316contigC-tenellus_contig8316:4002..5273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8316.4.1mRNA_C-tenellus_contig8316.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8316 3648..5773 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8316.4.1 ID=prot_C-tenellus_contig8316.4.1|Name=mRNA_C-tenellus_contig8316.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=424bp
MTCAGGLLDYHALQALDFFFSFMAVATVVLYLCPLPWDDAPCHTEQQLGT
GPWDTDTSTVSAASSSNAGRNSGRFDEALASDGDEDPVGNVRRSWSTGMR
ETPRNEWELSSLLPLALSASGPNPTRVVGKGGGASLAALYVFLIPPLLAA
VVDDPTKGRNIVLTFFVCGVVVVLSWGRLIAVDMAARAQRQGKRKGRKNG
GVWGAEDTDVEQDLCEEEAGARLGERDDPYYGGNEAMLFPSKQPGSRQGI
EERGQESKVGPRWLHLRWWSRFCGAMWLSAGRVFGGGDEGSGRVDWTQVG
KGAAGFVLGFACFTVQGSDWARASYYLWHSAWHVLAMGSTLPLIRARRWG
IHPARLSSPHPPHYPRRKPHLGSHFLRSLSMPSMTHLLNGEGIVSSRDER
GQEQRVQSGSFEMSPFLQGRAPS*
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