prot_C-tenellus_contig831.1.4 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig831.1.4
Unique Nameprot_C-tenellus_contig831.1.4
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length368
Homology
BLAST of mRNA_C-tenellus_contig831.1.4 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 9.870e-101
Identity = 174/360 (48.33%), Postives = 216/360 (60.00%), Query Frame = 0
Query:    1 MGTLEGIEDSHILYG-KPVCRAQVCGVVVHVKLGSTK-KGSYVKYLLDDGTGFLACTHYEQDL-QGVKREAHTERHNLGDLLVVQGKLKRFKGAREIMIVTARRVTDPNEEVLHWVRAMELTKTVYTLPFDWAAYVDKQRVLDANHVHTPHCACGALYVKALGYCRCVANPMCCDPDFVFRDAMLSHLCALEEILP-PGIQLHFQFARDVRDEPSLQETARQVVAASSVGGGWDRKGLPIPAKDSTVSEGGGGSTLGNLVSAREGKLTTKATLQPKVLELFRATMYRLVKDGVVHLLDREEDIYVLMSVGRVLQPSVEHLCREKGLQLTQENEIIKVLQSTAFYHHLPGLRIRACLNSMK 356
            +GTL GI+DSH+L+G K + R +V GVVVHVK G+TK  GSYVKY+LDDGTG L CT YE+    G     H+ERH LG+LLVVQGKLKR++GARE+ I +A + TDPN+E LHW+R +EL KTVY  PF    Y+D++ V  ++      C CGA Y +A+GYCRCVA P+  DP F FRDA+L+ L A EE L  P   L FQFARD   E      A    AA+  G                                           Q K LEL RA M  L +DG +H LDR  D+YVL+S GRVL+P+VE  CR + L L+QENEII+ LQ +A  HH+PG RIRAC+  MK
Sbjct:   68 LGTLGGIDDSHVLHGNKAIHRVEVSGVVVHVKPGATKASGSYVKYILDDGTGLLPCTQYERHAGTGATHRGHSERHELGELLVVQGKLKRYRGAREVAITSASKPTDPNQEALHWLRCVELGKTVYRPPFQRDDYIDEELVAGSSQARPTQCGCGAAYAEAVGYCRCVAAPLALDPTFEFRDALLARLAAKEESLAGPDEHLRFQFARDRPAE------AGAAAAAAPRG----------------------------------------VMQQAKALELLRAVMSSLHRDGALHFLDRARDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVYRMK 381          
BLAST of mRNA_C-tenellus_contig831.1.4 vs. uniprot
Match: A0A6A5AWS3_9STRA (OB domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AWS3_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.380e-10
Identity = 85/358 (23.74%), Postives = 137/358 (38.27%), Query Frame = 0
Query:   13 LYGKPVCRAQVCGVVVHVKLGSTKKGSYVKYLLDDGTGFLACTHYEQDLQGVKREAHTERHNLGDLLVVQGKLKR--FKGAREIMIVTARRVTDPNEEVLHWVRAMELTKTVY-TLPFDWAA--YVDKQRVLDANHVHTPHCACGALYVKALGYCRCVANPMCCDPDFVFRDAMLSHLCALEEILPPGIQLHFQFARDVRDEPSLQETARQVVAASSVGGGWDRKGLPIPAKDSTVSEGGGGSTLGNLVSAREGKLTTKATLQPKVLELFRATMYRLVKDGVVHLLDREEDIYVLMSVGRVLQPSVEHLCREKGLQLTQENEIIKVLQSTAFYHHLPGLRIRACLNSMKSEEVAKSEG 365
            L G+ V R  + G +  ++     +   V+Y+LDDG+G +    +E+ +  V          LGD++ VQGKLKR  +  A E+ I     VTDPNEEVLHW+    L  TVY + P + A      ++R + A            L    LG    +  P   +  F    A+  H        PP   + F+F   V++   +                     L +P     ++                                FR     L K G+ HL D + D+Y  +++   LQP +    R++G + +  + + KV+Q   F  HL    I A ++ +    V  + G
Sbjct:   29 LRGRIVTRVHLVGWITSMQ----PRAGRVEYMLDDGSGEVNLVKWEEAMGNVLA--------LGDVVRVQGKLKRSTWSNAVEVTISKVVLVTDPNEEVLHWMEVRHLFLTVYLSTPCEHATPQLEREERPVQAF-----------LRQVFLGTADDIVLPTTDEDHFACSVALFLHRRQQATQPPPNSPIRFRFHELVKNADEM---------------------LQVPNGAPRITA-------------------------------FRRAFTVLRKAGLCHLEDADNDVYCFVTLPAALQPWIVGTVRDEG-ETSVSHLVSKVVQLKLF-RHLSLDWIAAAIDELSKANVLSATG 309          
BLAST of mRNA_C-tenellus_contig831.1.4 vs. uniprot
Match: A0A397B2S9_9STRA (OB domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B2S9_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.460e-7
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   41 VKYLLDDGTGFLACTHYEQDLQGVKREAHTERHNLGDLLVVQGKLKR--FKGAREIMIVTARRVTDPNEEVLHWVRAMELTKTVY 123
            V+Y+LDDG+G +    +E+ +  V          LGD++ VQGKLKR  +  A E+ I     VTDPNEEVLHW+    L  TVY
Sbjct:    5 VEYMLDDGSGEVNLVKWEEAMGNVLA--------LGDVVRVQGKLKRSTWSNAVEVTISKVVLVTDPNEEVLHWMEVRHLFLTVY 81          
BLAST of mRNA_C-tenellus_contig831.1.4 vs. uniprot
Match: A0A1Y2I0K1_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I0K1_9FUNG)

HSP 1 Score: 57.0 bits (136), Expect = 1.490e-5
Identity = 36/126 (28.57%), Postives = 62/126 (49.21%), Query Frame = 0
Query:    8 EDSHILYGKPVCRAQVCGVVVHVKLGSTKKGSYVKYLLDDGTGFLACTHYEQDLQGVKREAHTERHN-------LGDLLVVQGKLKRFKGAREIMIVTARRVTDPNEEVLHWVRAMELTKTVYTLP 126
            + +++LYG P+ R  + G+V  V   ST     +   +DDG+ F   T +    + +  E    R N       LGDL+ V G++  ++G R + +    +V DPNE +LH +RA+   + +   P
Sbjct:   39 KPTYLLYGHPLSRVSIAGIVTSVTTRSTS----ITATIDDGSLFAIPT-FRWLPKALANEPDPNRFNQLACVPELGDLVTVVGQVNEYQGVRRVHVEHWAKVNDPNETMLHTLRAIGAARYLKQAP 159          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig831.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LM21_ECTSI9.870e-10148.33Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6A5AWS3_9STRA8.380e-1023.74OB domain-containing protein n=1 Tax=Aphanomyces a... [more]
A0A397B2S9_9STRA1.460e-743.53OB domain-containing protein n=3 Tax=Aphanomyces a... [more]
A0A1Y2I0K1_9FUNG1.490e-528.57Uncharacterized protein (Fragment) n=1 Tax=Catenar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 3..122
e-value: 1.2E-21
score: 78.5
NoneNo IPR availablePANTHERPTHR13989:SF33CST COMPLEX SUBUNIT STN1coord: 10..132
IPR018856CST complex subunit Stn1, N-terminalPFAMPF10451Stn1coord: 15..121
e-value: 3.4E-8
score: 32.8
IPR040260Replication factor A protein-likePANTHERPTHR13989REPLICATION PROTEIN A-RELATEDcoord: 10..132
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 8..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig831contigC-tenellus_contig831:6795..8624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig831.1.4mRNA_C-tenellus_contig831.1.4Choristocarpus tenellus KU2346mRNAC-tenellus_contig831 5258..8878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig831.1.4 ID=prot_C-tenellus_contig831.1.4|Name=mRNA_C-tenellus_contig831.1.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=368bp
MGTLEGIEDSHILYGKPVCRAQVCGVVVHVKLGSTKKGSYVKYLLDDGTG
FLACTHYEQDLQGVKREAHTERHNLGDLLVVQGKLKRFKGAREIMIVTAR
RVTDPNEEVLHWVRAMELTKTVYTLPFDWAAYVDKQRVLDANHVHTPHCA
CGALYVKALGYCRCVANPMCCDPDFVFRDAMLSHLCALEEILPPGIQLHF
QFARDVRDEPSLQETARQVVAASSVGGGWDRKGLPIPAKDSTVSEGGGGS
TLGNLVSAREGKLTTKATLQPKVLELFRATMYRLVKDGVVHLLDREEDIY
VLMSVGRVLQPSVEHLCREKGLQLTQENEIIKVLQSTAFYHHLPGLRIRA
CLNSMKSEEVAKSEGDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018856Stn1_N
IPR040260RFA2-like
IPR012340NA-bd_OB-fold