prot_C-tenellus_contig8301.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8301.1.1
Unique Nameprot_C-tenellus_contig8301.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length235
Homology
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BLAST of mRNA_C-tenellus_contig8301.1.1 vs. uniprot
Match: D8LMN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN6_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 2.840e-6
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 0 
Query:   53 IDIGNASSFRVSYWVVHEDKWVRDKKTDAVTTHMDITLGVANTVGYATVGGGKKVK-----LTKEYSARN-YFLVKDSRGGPCDKGEVVHVTTVEFPKGVKTLRVFGY--FEVSGTWIRFKDKVYSIQRGKKAFVLTAINQVLKQY 190
            +++ N S +RVSYWVV+EDK         V  +++  L    +  Y T       K     +  E++  + YFL +D R       +      + FPKG + LRV+ Y  FE    W  F+DKV+   RGK+ F ++  NQ ++ +
Sbjct:   33 LELRNESDYRVSYWVVNEDKLTTAAVKRRVFRNIEDQLNDGGS--YRTNAKHHNAKHGWDVINAEHALDDEYFLRRDYRP------DAATAKKLRFPKGSRQLRVYAYAWFEKQKEWRVFRDKVFDNGRGKR-FRISTTNQCVEPF 169
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8301.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMN6_ECTSI2.840e-630.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8301contigC-tenellus_contig8301:4325..5339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8301.1.1mRNA_C-tenellus_contig8301.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8301 3304..5484 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8301.1.1 ID=prot_C-tenellus_contig8301.1.1|Name=mRNA_C-tenellus_contig8301.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=235bp
MGTSSSKTSTKRNPLPKLGKVYHNPVWEALSNDEGHAATLVFPKMKRSDS
PYIDIGNASSFRVSYWVVHEDKWVRDKKTDAVTTHMDITLGVANTVGYAT
VGGGKKVKLTKEYSARNYFLVKDSRGGPCDKGEVVHVTTVEFPKGVKTLR
VFGYFEVSGTWIRFKDKVYSIQRGKKAFVLTAINQVLKQYIEDYNTRKQF
KDYQINRDAEMELTAQASNPDGDVEFDFNSPSSG*
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