prot_C-tenellus_contig8279.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8279.2.1
Unique Nameprot_C-tenellus_contig8279.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length622
Homology
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BLAST of mRNA_C-tenellus_contig8279.2.1 vs. uniprot
Match: A0A6H5KNA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA0_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.860e-14
Identity = 90/249 (36.14%), Postives = 107/249 (42.97%), Query Frame = 0 
Query:    2 QSTDASADNEVCAILSSPVQ--KYVVKPQARPGGVGDTGRLGPPSPRANGSHGHLGILGVGSSG------------VIVGSTVTKPSGSSGGRGVGRAPSLVRPPGAPSPPRSPVLPSASGGTWDP--QDQRSAFSVPVGRVGRLNGCHDQGREENGDRAPI------AATSAFGSVDLGGFRVVRGDGLEDDAVIKGQGGKGVPNTQDGIVRVGGGRTPGPAR--KQPLVSSDHQGLGQEQGMGPGGA 226
            Q  DASAD EV AILSSPVQ  K+VVKPQ RPGG        P SP ANG+   +      + G            V  G+      G      +G   +      APSPP++P LP  S  +WDP  Q   SAFSVP GR                             ++  GS+ LGGFR V G  L+D A +  Q   G   +       GGGRTPGP R  + PL  S    LG   G   GGA
Sbjct:   10 QGGDASADKEVMAILSSPVQQKKFVVKPQPRPGGAI------PASPAANGNAAFVPPASATTLGGDRRDATAGLPRVRCGAVEAVVGGGXXXXXIGAVDATGL--AAPSPPQTPGLPKPSSASWDPHVQSSSSAFSVPAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXVCSAGIGSMSLGGFRSVGGGPLQDRAPLSHQAASGDDRSSTRRQGRGGGRTPGPTRDPRYPLEDST---LGHNSGALGGGA 247
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8279.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNA0_9PHAE4.860e-1436.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8279contigC-tenellus_contig8279:3280..5837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8279.2.1mRNA_C-tenellus_contig8279.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8279 2379..5837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8279.2.1 ID=prot_C-tenellus_contig8279.2.1|Name=mRNA_C-tenellus_contig8279.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=622bp
MQSTDASADNEVCAILSSPVQKYVVKPQARPGGVGDTGRLGPPSPRANGS
HGHLGILGVGSSGVIVGSTVTKPSGSSGGRGVGRAPSLVRPPGAPSPPRS
PVLPSASGGTWDPQDQRSAFSVPVGRVGRLNGCHDQGREENGDRAPIAAT
SAFGSVDLGGFRVVRGDGLEDDAVIKGQGGKGVPNTQDGIVRVGGGRTPG
PARKQPLVSSDHQGLGQEQGMGPGGAGGGLRRPDPSQQLVLDGRPGEDYG
YSSFRSGGLVQQGDLGVGGGLEVSGVTVSSESLPSTCPNPSSHVLTTLSS
SSSTLVDGTRTLPAASTGEDLEGGGHADGSADWGIMRYGLTLATPVSVQV
EGRGREYGPSGQQGQPVSSAEDSSTVASMLDSLSLSDITAQAGGAGRMGT
AGLGKGQAHGREVEHGVPNFGFLNSGGLPQYRLADVQSQLLPKAHDVAPQ
PQQSKSYVPLQRKHHPLEFAPRPGAARLSGVAAGGSDPDAGYVHRHRSSR
EQQGQGLGCAEGDVSSQAGLMAGTGLGAGSLRWHHPQRGSSLGPGLEPSG
AVSGTGGRGVDAGLEGRGISSGSGEQIRRHGGHQGNDQGQDLGQGVREVA
PSLEAHEDSQLCHQQQSSLRQQ
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