prot_C-tenellus_contig8269.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8269.1.1
Unique Nameprot_C-tenellus_contig8269.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length409
Homology
BLAST of mRNA_C-tenellus_contig8269.1.1 vs. uniprot
Match: A0A6H5K2V5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.860e-24
Identity = 184/446 (41.26%), Postives = 219/446 (49.10%), Query Frame = 0
Query:    4 ISASNGGGGLGPPPGLPQSSSTAELVALGLIGSDTADETATVGSSD--YNSDXXXXXXXXXXXXXXXXXXXXXGIGVGTAGGLSVSTSXXXXXXXXXXXXVSKVLGTGSAGGMGLGLKTPSLTNLANMVRSQSVSSFHSETSLFTDP-----ATTTESPAWGS--RNHDVVGG---------------VGGNSSAAVMSSSLGSL-----SGVGGS---GSTGNGLGGVDLSV--FGGRTGLASSSRRVSDEDHGIPSWATAAAAAVAQRRSVGSSALANGAV--PRTAVPPTSGSR------RSLVYNHSDTDLVASFGRLGFGSVGGTPWSPLTSPNSSPMFGASAPLLE-DSLHLGPGQSLDQGASSSGGGLGGGISIPQGSAGGGFDHFTSNTDSPVHRMASGHVHMGIRSGIGGSNNGDSAS-RLPRHASYPSLSRVGGGG 405
            +SAS   G L PPPGLP+SSSTAELVALG   S   +    + SSD      XXXXXXXXXXXXXXXXXX X G   G  GG +  T   XXXXXX               GMGLGL+  SLTNLANMVRSQSVSSFHSE  +F        +   ESPAWGS   N D +G                +  + S     +  G+L     +G G S   G TG G G  DLS   F GR G A+    V   D G+ +                   +  G+   PR  VP   G        R++V+N SDTDLVASF R GFG  G + WSPL SP +SP+ GA  PLLE D L L   ++  +GA +SGG            AGG      ++T  P     + H   G+  G G +    S   RLPRHASYPSL+   GGG
Sbjct:    8 LSASASSGSLAPPPGLPRSSSTAELVALGFDPSGGMEGGNDLNSSDGGXXXXXXXXXXXXXXXXXXXXXXVXGGHDAGDIGGKNDGTGGTXXXXXX---------------GMGLGLRNHSLTNLANMVRSQSVSSFHSE--IFASGGKPVGSAAVESPAWGSYPANLDKMGSGXXXXXXXXXEDIFTLSPSPSVGPRGAGRGALPMRPPTGGGDSDVVGGTGAGAG-ADLSPQQFAGR-GTAARREVV---DRGMSAXXXXXXXXXXXXXXXXXXXMGGGSSFDPRGIVPSGPGRSGALPGGRAMVHNRSDTDLVASFSRFGFGQGGVSRWSPLMSPTASPLVGA--PLLEEDPLDLELEENASRGAGASGG------------AGGA----AADTFGPPSSFLTSHGRRGLMDGQGAAGEAPSMEVRLPRHASYPSLTVSRGGG 413          
BLAST of mRNA_C-tenellus_contig8269.1.1 vs. uniprot
Match: D8LNL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL2_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.120e-21
Identity = 160/364 (43.96%), Postives = 188/364 (51.65%), Query Frame = 0
Query:    4 ISASNGGGGLGPPPGLPQSSSTAELVALGLIGSDTADETATVGSSD-------YNSDXXXXXXXXXXXXXXXXXXXXXGIGVGTAGGLSVSTSXXXXXXXXXXXXVSKVLGTGSAGGMGLGLKTPSLTNLANMVRSQSVSSFHSETSLFTDP-----ATTTESPAWGS--RNHDVVGGVGGNSSAAVMSSSLGSLS---GVGGSGS--------TGNG--------------------LGGVDLSV--FGGRTGLASSSRRVSDEDHGIPSWATAAAAAVAQRRSVG--SSALANGAVP----RTAVPPTSGSRRSLVYNHSDTDLVASFGRLGFGSVGGTPWSPLTSPNSSPMFGASAPLLED 314
            +SAS   G L PPPGLP+SSSTAELVALG   S   D    + SSD           XXXXXXXXXXXXXXXXXX   G+  G  GG    T XXXXXXXXX               MGLGL+  SLTNLANMVRSQSVSSFHSE  +F        +T  +SPAWGS   N D +G              + ++S   G  G+G         TG G                      G DLS   F GR G A+    V   D G+ + + A +   +QRR +G  SS    G VP    R+  PP   S R++V+N SDTDLVASF RLGFG  G + WSPL SP +SP+ GA  PLLE+
Sbjct:    6 LSASASSGSLAPPPGLPRSSSTAELVALGFDPSGVMDGGNDLNSSDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLDAGDMGGKDDGTXXXXXXXXXX---------------MGLGLRNHSLTNLANMVRSQSVSSFHSE--IFASGGKPVRSTAIDSPAWGSYPANLDKMGSGXXXXXXXXXXEDMFTVSPSMGPRGAGRGTLPMRPPTGGGDRGGVXXXXXXXXXDVXXXXXXGADLSPQQFAGR-GTAARREVV---DRGMSAGSAAGSTRTSQRRPMGGGSSFDPRGMVPSGPGRSGAPP---SGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGA--PLLEE 343          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8269.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2V5_9PHAE2.860e-2441.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNL2_ECTSI1.120e-2143.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 299..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8269contigC-tenellus_contig8269:104..2260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8269.1.1mRNA_C-tenellus_contig8269.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8269 104..2263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8269.1.1 ID=prot_C-tenellus_contig8269.1.1|Name=mRNA_C-tenellus_contig8269.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=409bp
MSGISASNGGGGLGPPPGLPQSSSTAELVALGLIGSDTADETATVGSSDY
NSDGGGYDPRSPGLPVSSSSGGVVGIGVGTAGGLSVSTSAGLGPATNGGG
GVSKVLGTGSAGGMGLGLKTPSLTNLANMVRSQSVSSFHSETSLFTDPAT
TTESPAWGSRNHDVVGGVGGNSSAAVMSSSLGSLSGVGGSGSTGNGLGGV
DLSVFGGRTGLASSSRRVSDEDHGIPSWATAAAAAVAQRRSVGSSALANG
AVPRTAVPPTSGSRRSLVYNHSDTDLVASFGRLGFGSVGGTPWSPLTSPN
SSPMFGASAPLLEDSLHLGPGQSLDQGASSSGGGLGGGISIPQGSAGGGF
DHFTSNTDSPVHRMASGHVHMGIRSGIGGSNNGDSASRLPRHASYPSLSR
VGGGGGGGY
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