prot_C-tenellus_contig8257.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8257.2.1
Unique Nameprot_C-tenellus_contig8257.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length76
Homology
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A6H5KWD5_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD5_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.310e-19
Identity = 50/79 (63.29%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVE-SHQTVRL---SRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGLQNLGNTCFMNACLQCL++T+ L + F     H+  RL   S  SPT GALA AF ELV  V  SP HS+VSPAQV
Sbjct:  533 LVGLQNLGNTCFMNACLQCLLHTDALVDLFRGRHGHREQRLRSHSTTSPTHGALAQAFGELVAMVEASPAHSNVSPAQV 611          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: D8LJ64_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ64_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.780e-19
Identity = 50/79 (63.29%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVE-SHQTVRL---SRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGLQNLGNTCFMNACLQCL++T+ L + F     H   RL   S  SPT GALA AF ELV  V  SP HS+VSPAQV
Sbjct:  320 LVGLQNLGNTCFMNACLQCLLHTDALVDLFRGRYGHSEQRLGSHSSASPTHGALAQAFGELVAIVEASPAHSNVSPAQV 398          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A7S2V666_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V666_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.930e-14
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            +VGL NLGNTCFMN+CLQCL+NT  LA +FL  ++ +  L R SP +G LA AFA+LV  V+     +SV+P+ +
Sbjct:    1 MVGLTNLGNTCFMNSCLQCLLNTGHLAEWFLQGAYDSA-LCRTSPMRGQLAKAFADLVNQVHSQANRTSVNPSNL 74          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: F0XZK7_AURAN (USP domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZK7_AURAN)

HSP 1 Score: 72.4 bits (176), Expect = 3.330e-13
Identity = 40/75 (53.33%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGL NLGNTCF+NA LQCL+    L   FL  S+  + ++  SP++GA+A AFAELVR V  +  HS+VSPA++
Sbjct:    1 LVGLTNLGNTCFLNAPLQCLLGVAPLVEVFLDGSYAAM-VNGASPSKGAIAHAFAELVRDVYAAEPHSAVSPAKL 74          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A5D6Y508_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y508_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 7.680e-13
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGLQNLGNTCFMN+CLQC+ N   +A +F    H    ++  SPT+GALA AF +L++ +  S   SSV P+++
Sbjct:  564 LVGLQNLGNTCFMNSCLQCVSNIPSVAQYFASNVHAK-EVNEASPTKGALAFAFGDLMKALWGSDKFSSVRPSEL 637          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A0L0HQC4_SPIPD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HQC4_SPIPD)

HSP 1 Score: 71.2 bits (173), Expect = 1.040e-12
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQ 74
            LVGLQNLGNTCFMN+ LQC  +TE+L  +FL   ++   ++  SP +G LATAFA LV+ V  S  + S+SP+Q
Sbjct:  440 LVGLQNLGNTCFMNSILQCAFSTELLMGYFLSGDYKG-DINPGSPMKGQLATAFAALVKEVMKSNAYRSISPSQ 512          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A2D4BKC3_PYTIN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKC3_PYTIN)

HSP 1 Score: 70.1 bits (170), Expect = 2.630e-12
Identity = 33/75 (44.00%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGLQNLGNTCFMN+CLQC+ N   + ++F   ++    ++  SPT+GALA AF +L++ +  SP  ++  P ++
Sbjct:  181 LVGLQNLGNTCFMNSCLQCVSNVPAVVHYFQSGAYLK-EINETSPTKGALAIAFGDLIKALWSSPEFTATRPVEL 254          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A7S1C8E4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8E4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.470e-11
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    3 GLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELV 58
            GL NLGNTCFMN+CLQC+ NT  L  +FL ++H    ++R+SPT+G LA A+A+LV
Sbjct:    2 GLYNLGNTCFMNSCLQCVSNTPDLTAYFLADAHAR-DVNRRSPTKGRLAAAYADLV 56          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: A0A067CI15_SAPPC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CI15_SAPPC)

HSP 1 Score: 67.8 bits (164), Expect = 1.700e-11
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGLQNLGNTCFMN+CLQCL N  ++  +F +  H    L+  SPTQG LA  F +L + +      SS  P ++
Sbjct:  146 LVGLQNLGNTCFMNSCLQCLSNVPLVMRYFRMGQHLQ-ELNEASPTQGKLACVFGDLTQVLWQQAEFSSTRPVEL 219          
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Match: D0NHJ1_PHYIT (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NHJ1_PHYIT)

HSP 1 Score: 67.8 bits (164), Expect = 1.710e-11
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGALATAFAELVRCVNCSPIHSSVSPAQV 75
            LVGLQNLGNTCFMN+CLQC+ N   L  +F    +    ++  SPT+GALATAF +L++ +      ++  P ++
Sbjct:  194 LVGLQNLGNTCFMNSCLQCVSNLPALVKYFHPGLYAR-EINDTSPTKGALATAFGDLIKALRTGDKFTATRPVEL 267          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8257.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWD5_9PHAE1.310e-1963.29USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJ64_ECTSI1.780e-1963.29Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A7S2V666_9STRA4.930e-1452.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0XZK7_AURAN3.330e-1353.33USP domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A5D6Y508_9STRA7.680e-1349.33Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pyth... [more]
A0A0L0HQC4_SPIPD1.040e-1252.70Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Spiz... [more]
A0A2D4BKC3_PYTIN2.630e-1244.00Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pyth... [more]
A0A7S1C8E4_9STRA1.470e-1157.14Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A067CI15_SAPPC1.700e-1146.67Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Sapr... [more]
D0NHJ1_PHYIT1.710e-1144.00Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 2..74
e-value: 2.4E-13
score: 50.2
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 1..75
e-value: 6.8E-18
score: 67.0
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 1..73
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 3..18
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 2..75
score: 13.595
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8257contigC-tenellus_contig8257:5877..6104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8257.2.1mRNA_C-tenellus_contig8257.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8257 5877..6104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8257.2.1 ID=prot_C-tenellus_contig8257.2.1|Name=mRNA_C-tenellus_contig8257.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=76bp
LVGLQNLGNTCFMNACLQCLMNTEVLANFFLVESHQTVRLSRKSPTQGAL
ATAFAELVRCVNCSPIHSSVSPAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf