prot_C-tenellus_contig8226.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8226.2.1
Unique Nameprot_C-tenellus_contig8226.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length1025
Homology
BLAST of mRNA_C-tenellus_contig8226.2.1 vs. uniprot
Match: A0A6H5L1M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M4_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 9.300e-139
Identity = 381/1064 (35.81%), Postives = 532/1064 (50.00%), Query Frame = 0
Query:    1 KVQNVVDAFPNDLGMYEAGLSLLVGLAEYGGVVLESSSSCV-------TSITATAVVKRLGRSRGLQLVATCLTYASNPDWA-------RGTSDASLAHPEVFLLLACKAIALLGK-TPENRDNLVALGVCKGLTRAMALGAAGCISAASHPSKVTALTELEPSPHEQENSNDRKHDSRTMRRHRLQQIWAALALAELASGKSNEHRCAVLEEAGALSALFAAMSRSPDNHLLQYAGCLTLGHMARGSRGEALNHIGRRGGVTAVVRALIACPGDLDMALAGLTAVTNVSPGSENRRLLGEAGACPQVVATLSSFLNVAAVAEEGCHAVANLAVLSGFNRTVLGQSGAVEAVAEALSNHPSDPGVQHWGVTAAAEMVADTDPSSNIKRLMEAEMPGLVIRAMAKLLNEPATQANGLRLLAKLATQMGSSSYSCCEGDGEFSALWDVNMLAATMRPLNLYPFHPSVQHWGLAIIRSFSGNSNLRSQWCRVGAAGAVNQALQVYGAGEGGNPHYPSNDCDKGRKGGNGGKERTAAYHREEALCIQFQACACALHIAKDG-EARQELVQGSSGQALAGMMLANPHDICVQQGGLSVLASLAAIGMDNREALVGVSSGNGVVIQAVLQAFETFPMNMRVQNEGALTLQNLSLASSGAQVMARAGVVPVLVQAL---FRQSLTRPTFDVVSNGKE-----------LSRGEWEGRHALVYILKALGNLVIDIDHVSDLVGHRGACEAVTATLKGHPHDLDLQAAGCKAIGALALHGTLTCEDLAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVLECEGMLNLISNILNQFSGDSEVVVQGLQALVEIALAPSARSTNGVLAATTTAGAYASVATTSKSQQVQKNGASGQEMRLPVT-----ISSTHPPSSFHSSTTSTTAAGETSGNAWAVGTVLAAMECNPHIDVCNASFDALLRLL---GDTTHQSAH-SSTDETISTNANKQGKSLGLSSFSSDTRSPSNSMVERIGETMQWAKVTYAVKRALKLNKKHSGMLAKKGGVILTVASVARAKAL 1025
            K+  +VDA+P+D+ +  AGL+LLVG++E+G    E+S             +T  A+  RLG    +      L   + P WA        G  +  LA     LL++CKA  LL + +  NR+ L ++G  + L+RA+AL      S   +  KV  LT   P   +Q++    + ++         Q+WAA AL EL+ G  N  RC+ L   GAL AL AAM++S     LQ AGC+ LG++A   + + L  +GR GG  AV  A  ACPGD D+ALAGL AV  +S  SENRRLLG+AG CP +   L  F +  AVAEEGC AV  LA LSGFNRT LG + A EA A AL  HPS P VQ WG++AAA +VA+TDPS N  R+  A + GL ++A+ K  + P  QA GL+  AK+AT           G     A+W   ++   +R L LY    ++QHWG+A +R+ +G+ +    W   GA  AV + L  +G  +G   H   ++    R         T     EE+LC+QFQACA A ++A    +AR+ +V+  +G+ALAGMM +N  +    +G L+ LA+L+A G DNR+                  A E+FP + RV+ EGALT+QNLSL   GA+ M +AGV PV+++ L     +S +  T +    G+E            S G+   R  +VY+L  L N+     ++SD +G  GAC+AV   L+ HP DL +QA+G KA+ ALAL G    +DLA +                                         L   G + L+ + L QF+ D+EVV Q  +ALVEI L      T        +     SVA   +   V+++ +  Q   L +T     I+    P      T    A GE S    AVG VLA +E NP  DVC  +F AL RLL   G T  +S    S D    T  N+   +   ++    + S     V   G  +Q AKV  AVKRALK+       LA +GG ILT+ +VAR +AL
Sbjct: 2211 KLMKIVDAYPDDIEVRRAGLALLVGVSEHGEGTTEASDDETEENDDQGNQMTTGALASRLGFVGAVDFAGVWLRQVTAPTWAWVAGHGGGGGEEDELARAW-DLLMSCKAAFLLTRHSSTNRNRLTSMGAMEALSRAVAL------SGRKNNLKV-GLTP--PVGLQQDSKLSIQAET---------QLWAAQALTELSGGHDNASRCSALMRCGALRALLAAMNKSSSASQLQRAGCMALGNVASCLKPKDLQALGRNGGAQAVTGAFEACPGDKDVALAGLLAVAKLSMSSENRRLLGQAGVCPMISKELLDFSHDEAVAEEGCRAVTRLAALSGFNRTALGHARAAEATATALLKHPSKPKVQRWGLSAAAALVAETDPSGNTDRITSAGILGLAVKALMKFRHNPTVQAEGLKTFAKVATS----------GKDGNEAVWAAGVVLTVVRALGLYLNDANIQHWGVATMRALTGSDDRCDVWRGAGAPEAVVRTLAAFGR-DGTGRHATHDEEGLSRA------SETRPCTAEESLCVQFQACATAFNLAMSSPDARRRIVREGAGEALAGMMKSNSSNQAALRGALATLAALSASGADNRKP----------------SALESFPEDRRVRCEGALTVQNLSLTPGGARAMTKAGVAPVIIRLLRTTLEESSSPTTSEREGEGEEGPTLNGAIANGHSGGKPADRDVIVYLLNGLANMAAADKNLSDFIGRHGACKAVVFALEHHPRDLQMQASGVKAVRALALGGCRNVQDLARLRGPSAIARAQGLFLRDREIQLAVGAAMEALCRGGNRANQEALVGAGTIVLLESALTQFASDAEVVSQSFRALVEIVLGGVGPKTVMGAEGEDSQRCSRSVAGVEEEPSVKRSFSLPQ---LTLTDGEAAINGPLQPGGDAGGTVGGVAVGEVS---CAVGMVLAVLERNPCRDVCLEAFSALGRLLVNLGATDSESVSVGSNDVRGQTYQNRAATADDTTACHKVSHSGMKGGVSPAGGLLQLAKVRQAVKRALKIYGCDDVDLASRGGQILTLIAVARGRAL 3216          
BLAST of mRNA_C-tenellus_contig8226.2.1 vs. uniprot
Match: D8LNH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH4_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 2.700e-116
Identity = 307/823 (37.30%), Postives = 417/823 (50.67%), Query Frame = 0
Query:  229 MARGSRGEALNHIGRRGGVTAVVRALIACPGDLDMALAGLTAVTNVSPGSENRRLLGEAGACPQVVATLSSFLNVAAVAEEGCHAVANLAVLSGFNRTVLGQSGAVEAVAEALSNHPSDPGVQHWGVTAAAEMVADTDPSSNIKRLMEAEMPGLVIRAMAKLLNEPATQANGLRLLAKLATQMGSSSYSCCEGDGEFSALWDVNMLAATMRPLNLYPFHPSVQHWGLAIIRSFSGNSNLRSQWCRVGAAGAVNQALQVYGAGEGGNPHYPSNDCDKGRKGGNGGKERTAAYHREEALCIQFQACACALHIAKDG-EARQELVQGSSGQALAGMMLANPHDICVQQGGLSVLASLAAIGMDNREALVGVSSGNGVVIQAVLQAFETFPMNMRVQNEGALTLQNLSLASSGAQVMARAGVVPVLVQALFRQSLTRPTFDVVSNGKELSRGEWEGRHALVYILKALGNLVIDIDHVSDLVGHRGACEAVTATLKGHPHDLDLQAAGCKAIGALALHGTLTCEDLAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVLECEGMLNLISNILNQFSGDSEVVVQGLQALVEIALAPSARSTNGVLAATTTAGAYASVATTSKSQQVQKNGASGQEMRLPVTISSTHP----------------PSSFHSSTTSTTAAGETSGNAWAVGTVLAAMECNPHIDVCNASFDALLRLLGDTTHQSAHSSTDETISTNANK------QGKSLGLSSFSSDTRSPSNSM---VERIGETMQWAKVTYAVKRALKLNKKHSGMLAKKGGVILTVASVARAKAL 1025
            +A   R   L  +GR GG  AV  A  ACPGD D+ALAGL AV  +S  SENRRLLG+AG CP +   L  F +  AVAEEGC AV  LA LSGFNRT LG + A EA A AL  HPS P VQ WG++AAA +VA+TDPS N  R+  A + GL ++A+ K  + P  QA GL+  AK+AT           G     A+W   ++   +R L LY    +VQHWG+A +R+ +G+ +    W   GA  AV + L  +G  +G   H   ++   GR         T     EE+LC+QFQACA A ++A    +AR+ +V+  +G+ALAGMM +N  +    +G L+ LA+L+A G++NR+ L     G   V +AV  A E+FP + RV+ EGALT+QNLSL   GA+ M +AGV PV+++ L R +L   +F   S            R  +VY+L  L N+      +SD +G  GACEAV   L+ HP DL +QA+G KA+ ALAL G    +DLA +                                         L   G + L+ + L+QF+ D+EVV Q  +ALVEI LA S              G  A +    +  Q      +G E   PV  S + P                P      T    A GE S    AVG VLA +E NP  +VC  +F AL RLL      +  ++  E++S  +N       Q +       S+  + P N M   V   G  +Q AKV +AVKRALK+N+     LA +GG I+T+ +VAR +AL
Sbjct: 1738 VALSGRKNNLKALGRNGGAQAVTGAFEACPGDKDVALAGLLAVAKLSMSSENRRLLGQAGVCPMISKELLDFSHDEAVAEEGCRAVTRLAALSGFNRTALGHARAAEATATALLKHPSKPRVQRWGLSAAAALVAETDPSGNTDRITSAGILGLAVKALMKFRHNPTVQAEGLKTFAKVATS----------GKDGNDAVWAAGVVLTVVRALGLYLNDANVQHWGVATMRALTGSDDRCDVWRGAGAPEAVVRTLVAFGR-DGTGRHARHDEEGLGRA------SETRPCTAEESLCVQFQACATAFNLAMSSPDARRRIVREGAGEALAGMMKSNSSNQAALRGALATLAALSASGVENRKRLHRYKGG---VPKAVASALESFPEDRRVRCEGALTVQNLSLTLGGARAMTKAGVAPVIIR-LLRTTLEESSFPTTSE-----------REVIVYLLNGLANMAAADKSLSDFIGRHGACEAVVFALEHHPRDLQMQASGVKAVRALALGGCRNVQDLARLRGPSAIARAQGLFLRDREIQLAVGAAMEALCRGGNRANREALVGAGTIVLLESALSQFASDAEVVSQSFRALVEIVLAGS--------------GPKAVMGAEGEDNQRCSRSVAGVEEEPPVKRSFSLPQLTLTEGKAAIKGPLQPGEDAGGTVGGVAVGEVS---CAVGMVLAVLERNPCREVCLEAFSALGRLL-----VNLGATDSESVSVGSNDVRDQTYQNRVATTDDTSACHKVPHNGMKGGVNAAGGLLQLAKVRHAVKRALKINRCDDVDLALRGGQIITLTTVARGRAL 2506          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8226.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1M4_9PHAE9.300e-13935.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNH4_ECTSI2.700e-11637.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 189..231
e-value: 19.0
score: 11.2
coord: 633..674
e-value: 67.0
score: 6.9
coord: 562..632
e-value: 420.0
score: 0.7
coord: 277..319
e-value: 23.0
score: 10.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 304..485
e-value: 8.4E-8
score: 33.3
coord: 17..303
e-value: 3.7E-16
score: 60.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 517..669
e-value: 3.1E-7
score: 31.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 672..842
e-value: 7.0E-11
score: 43.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 859..896
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 942..967
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..166
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 457..655
coord: 238..361
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 457..655
coord: 238..361
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 688..834
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 688..834
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 91..417
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 449..829

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8226contigC-tenellus_contig8226:391..3522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8226.2.1mRNA_C-tenellus_contig8226.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8226 391..3522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8226.2.1 ID=prot_C-tenellus_contig8226.2.1|Name=mRNA_C-tenellus_contig8226.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1025bp
KVQNVVDAFPNDLGMYEAGLSLLVGLAEYGGVVLESSSSCVTSITATAVV
KRLGRSRGLQLVATCLTYASNPDWARGTSDASLAHPEVFLLLACKAIALL
GKTPENRDNLVALGVCKGLTRAMALGAAGCISAASHPSKVTALTELEPSP
HEQENSNDRKHDSRTMRRHRLQQIWAALALAELASGKSNEHRCAVLEEAG
ALSALFAAMSRSPDNHLLQYAGCLTLGHMARGSRGEALNHIGRRGGVTAV
VRALIACPGDLDMALAGLTAVTNVSPGSENRRLLGEAGACPQVVATLSSF
LNVAAVAEEGCHAVANLAVLSGFNRTVLGQSGAVEAVAEALSNHPSDPGV
QHWGVTAAAEMVADTDPSSNIKRLMEAEMPGLVIRAMAKLLNEPATQANG
LRLLAKLATQMGSSSYSCCEGDGEFSALWDVNMLAATMRPLNLYPFHPSV
QHWGLAIIRSFSGNSNLRSQWCRVGAAGAVNQALQVYGAGEGGNPHYPSN
DCDKGRKGGNGGKERTAAYHREEALCIQFQACACALHIAKDGEARQELVQ
GSSGQALAGMMLANPHDICVQQGGLSVLASLAAIGMDNREALVGVSSGNG
VVIQAVLQAFETFPMNMRVQNEGALTLQNLSLASSGAQVMARAGVVPVLV
QALFRQSLTRPTFDVVSNGKELSRGEWEGRHALVYILKALGNLVIDIDHV
SDLVGHRGACEAVTATLKGHPHDLDLQAAGCKAIGALALHGTLTCEDLAA
VGACAAVTRSMDLFRRDRQVQLACLAAVEALCRGGPTTCALVLECEGMLN
LISNILNQFSGDSEVVVQGLQALVEIALAPSARSTNGVLAATTTAGAYAS
VATTSKSQQVQKNGASGQEMRLPVTISSTHPPSSFHSSTTSTTAAGETSG
NAWAVGTVLAAMECNPHIDVCNASFDALLRLLGDTTHQSAHSSTDETIST
NANKQGKSLGLSSFSSDTRSPSNSMVERIGETMQWAKVTYAVKRALKLNK
KHSGMLAKKGGVILTVASVARAKAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold