prot_C-tenellus_contig8214.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8214.1.1
Unique Nameprot_C-tenellus_contig8214.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length131
Homology
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: D7FNI3_ECTSI (Clathrin assembly complex, medium subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI3_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 1.310e-51
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0
Query:   25 VQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGK-FQVRT 129
            VQFP+VVRTADL VSSGT LFDEA KV KW++GKL KDKSATM GT+ IQGPKPEESPP+QLSWKVPMASVSGLA+TSLQ+FNEKYRPYKGVRTLT+SGK FQVRT
Sbjct:  326 VQFPKVVRTADLHVSSGTCLFDEALKVAKWNLGKLFKDKSATMTGTLSIQGPKPEESPPVQLSWKVPMASVSGLAITSLQVFNEKYRPYKGVRTLTKSGKNFQVRT 431          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A7S2GAE1_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAE1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.650e-40
Identity = 69/106 (65.09%), Postives = 87/106 (82.08%), Query Frame = 0
Query:   25 VQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVRTS 130
            + FP+ VRT +L V+ GT L+DEA+KV KW++GKLS  K+  + GTM +QG   +E PPIQL WKVPMASVSG+A++SLQL NE+YRPYKGVRT+TRSGKFQVRT+
Sbjct:  126 IPFPKAVRTTNLTVNVGTCLYDEATKVAKWTIGKLS-SKNPQLTGTMVLQGGNTDEHPPIQLHWKVPMASVSGIAISSLQLTNERYRPYKGVRTITRSGKFQVRTA 230          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A7S2GKZ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKZ3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.850e-38
Identity = 68/105 (64.76%), Postives = 83/105 (79.05%), Query Frame = 0
Query:   25 VQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVRT 129
            + FP+ V+T +L  + GT L+DEA+KV KW++GKLS  KS  + GT+ + G K EESPPIQL WKVPMASVSG+A+ SLQL NE+YRPYKGVR  TRSGKFQVRT
Sbjct:  323 IPFPKGVKTTNLTANVGTCLYDEATKVAKWTIGKLSTSKSPQLTGTLVLHGTKLEESPPIQLKWKVPMASVSGIAIASLQLTNERYRPYKGVRATTRSGKFQVRT 427          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: I2CP32_NANGC (AP-3 complex subunit mu n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP32_NANGC)

HSP 1 Score: 141 bits (356), Expect = 9.620e-38
Identity = 65/106 (61.32%), Postives = 87/106 (82.08%), Query Frame = 0
Query:   25 VQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVRTS 130
            + FP+ VRT  L  ++GT L+DEASKV +W+VGK+S++++  + GT+ + G +PEESP IQ+ WKVPMASVSGL V SLQL NE+YRPYKGVRT+T+SG+FQVR+S
Sbjct:  327 IPFPKAVRTTHLQTNTGTVLYDEASKVARWTVGKMSRERNPQLTGTILLAGGRPEESPSIQVDWKVPMASVSGLTVLSLQLLNERYRPYKGVRTITKSGRFQVRSS 432          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A7S2SCM0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCM0_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.040e-36
Identity = 66/107 (61.68%), Postives = 87/107 (81.31%), Query Frame = 0
Query:   25 VQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGP-KPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVRTS 130
            + FP+VV+T +L V+ G  L+DEA+KV KW++GK+   K+  ++GTM +QG  K EE+PPIQL WKVP AS+SG+A++SLQL NEKYRPYKGVRT+ RSGK+QVRTS
Sbjct:  307 IPFPKVVKTTNLSVNYGAILYDEATKVAKWTIGKMPTSKTPQLSGTMVLQGQQKLEENPPIQLDWKVPTASISGIAISSLQLTNEKYRPYKGVRTIIRSGKYQVRTS 413          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A6V3B3W6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3B3W6_HETAK)

HSP 1 Score: 137 bits (345), Expect = 3.420e-36
Identity = 63/103 (61.17%), Postives = 84/103 (81.55%), Query Frame = 0
Query:   27 FPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVRT 129
            FP+ VRTADL  S+G  ++DEA+K VKW VGKL  +K+A++ G + ++G +PEESP ++L W+VPM SVSGLA++SL + NEKY PYKGVRT+TR+GKFQVRT
Sbjct:  321 FPKSVRTADLKGSTGEVIYDEAAKTVKWKVGKLHSNKNASLTGALMLEGARPEESPTLELGWEVPMTSVSGLAISSLNMSNEKYTPYKGVRTITRAGKFQVRT 423          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A7S1Z3J2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3J2_TRICV)

HSP 1 Score: 122 bits (305), Expect = 3.700e-33
Identity = 57/108 (52.78%), Postives = 81/108 (75.00%), Query Frame = 0
Query:   22 SFKVQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPK-PEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVR 128
            S  + FPR+VRTA+L V+ GT ++DEA KV KW++GKL + K   + GTM ++G K PE + P+ L+WK+P+ASVSGL+V+ L L  E Y+PYKGVR + +SG++QVR
Sbjct:   24 SVVIPFPRIVRTANLSVNVGTVIYDEAGKVAKWTIGKLDEQKRPQLTGTMLLEGTKKPESNAPLVLTWKIPLASVSGLSVSGLSLTGEMYKPYKGVRNICKSGRYQVR 131          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A7S2KC76_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KC76_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.440e-32
Identity = 62/117 (52.99%), Postives = 85/117 (72.65%), Query Frame = 0
Query:   21 GSFKVQ-------FPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRI--QGPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVR 128
            GSF V+       FP+V+RTA+L  + G  L+DE++K  KW++GKL + K   + GTM +   G +PEE+PP+QL WK+P+ASVSGLAV+ L L  E YRPYKGVRT+T+SG++QVR
Sbjct:  328 GSFSVENVVVTIPFPKVIRTANLTANLGKVLYDESAKTAKWTIGKLDERKKMVLTGTMILTKDGKRPEENPPLQLDWKIPLASVSGLAVSGLSLTGESYRPYKGVRTITKSGRYQVR 444          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A835YUG2_9STRA (Mu homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.170e-32
Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 0
Query:   25 VQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSK----DKSATMNGTMRIQ-GPKPEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVRTS 130
            V FPR VRTA+L  ++GT LFDEA+KV +WSVGKL+      +   M G + +Q G + EESP I ++WKVP+AS+SGL++ SLQL NE+Y+PYKGVRTLT+SGKF VRTS
Sbjct:  346 VPFPRAVRTANLSATAGTVLFDEAAKVARWSVGKLAMGSVGQRPPQMAGALVLQPGARLEESPSIHVAWKVPVASISGLSIASLQLTNERYKPYKGVRTLTKSGKFTVRTS 456          
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Match: A0A7S1Z3Q0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3Q0_TRICV)

HSP 1 Score: 122 bits (305), Expect = 1.430e-31
Identity = 57/108 (52.78%), Postives = 81/108 (75.00%), Query Frame = 0
Query:   22 SFKVQFPRVVRTADLVVSSGTFLFDEASKVVKWSVGKLSKDKSATMNGTMRIQGPK-PEESPPIQLSWKVPMASVSGLAVTSLQLFNEKYRPYKGVRTLTRSGKFQVR 128
            S  + FPR+VRTA+L V+ GT ++DEA KV KW++GKL + K   + GTM ++G K PE + P+ L+WK+P+ASVSGL+V+ L L  E Y+PYKGVR + +SG++QVR
Sbjct:  162 SVVIPFPRIVRTANLSVNVGTVIYDEAGKVAKWTIGKLDEQKRPQLTGTMLLEGTKKPESNAPLVLTWKIPLASVSGLSVSGLSLTGEMYKPYKGVRNICKSGRYQVR 269          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8214.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNI3_ECTSI1.310e-5184.91Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A7S2GAE1_9STRA5.650e-4065.09Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2GKZ3_9STRA8.850e-3864.76Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
I2CP32_NANGC9.620e-3861.32AP-3 complex subunit mu n=1 Tax=Nannochloropsis ga... [more]
A0A7S2SCM0_9STRA2.040e-3661.68Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6V3B3W6_HETAK3.420e-3661.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1Z3J2_TRICV3.700e-3352.78Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2KC76_9STRA1.440e-3252.99Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A835YUG2_9STRA6.170e-3259.46Mu homology domain-containing protein n=1 Tax=Trib... [more]
A0A7S1Z3Q0_TRICV1.430e-3152.78Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028565Mu homology domainPFAMPF00928Adap_comp_subcoord: 24..128
e-value: 5.5E-17
score: 62.0
IPR028565Mu homology domainPROSITEPS51072MHDcoord: 1..128
score: 13.238
NoneNo IPR availableGENE3D2.60.40.1170Mu homology domain, subdomain Bcoord: 21..94
e-value: 3.6E-15
score: 58.1
NoneNo IPR availablePANTHERPTHR10529:SF342AP-3 COMPLEX SUBUNIT MU-1coord: 24..129
NoneNo IPR availablePANTHERPTHR10529AP COMPLEX SUBUNIT MUcoord: 24..129
IPR036168AP-2 complex subunit mu, C-terminal superfamilySUPERFAMILY49447Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptorcoord: 24..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8214contigC-tenellus_contig8214:3573..6251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8214.1.1mRNA_C-tenellus_contig8214.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8214 2989..6395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8214.1.1 ID=prot_C-tenellus_contig8214.1.1|Name=mRNA_C-tenellus_contig8214.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=131bp
MALNLLALLDYRNSQVLCHLGSFKVQFPRVVRTADLVVSSGTFLFDEASK
VVKWSVGKLSKDKSATMNGTMRIQGPKPEESPPIQLSWKVPMASVSGLAV
TSLQLFNEKYRPYKGVRTLTRSGKFQVRTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028565MHD
IPR036168AP2_Mu_C_sf