prot_C-tenellus_contig8209.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8209.1.1
Unique Nameprot_C-tenellus_contig8209.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length86
Homology
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: A0A6H5KKY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKY5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.240e-30
Identity = 51/86 (59.30%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    1 FCLVQKEFPGRNTCELVDRYYGGWKKTEWYVAAKNAIITRKLQSRCWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDCI 86
            F   QK  PGR  CELVDRYYGGWK+T+ Y A K +I   K QS C  C   GDL+CCD C+ VYH +C+ LSVVP+GDWFCP C+
Sbjct:  886 FYAAQKALPGRQVCELVDRYYGGWKQTDGYRALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACV 971          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: A0A7S4D894_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D894_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 1.350e-18
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 0
Query:   11 RNTCELVDRYYGGWKKTEWYVAAKNAIIT-RKLQS-RCWICQEEGDLLCCDSCDGVYHLKCLR--LSVVPDGDWFCPDC 85
            R+  EL+D YY  +KKTE Y   K  +I  R+L +  C IC + GDL+CC++CD VYH++CL   LS +P+GDW+CP C
Sbjct:   51 RSISELMDYYYNKFKKTERYKILKKELIKFRELNNDHCAICNDGGDLICCEACDDVYHMECLDPPLSALPEGDWYCPTC 129          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: UPI0003F0836A (protein kinase C-binding protein 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0836A)

HSP 1 Score: 75.9 bits (185), Expect = 1.360e-14
Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:   40 RKLQSR----CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            R+L SR    CWIC +EG ++CC+ C  VYH++CL+LS+ P+GDWFCP+C
Sbjct:  111 RELDSRNDFYCWICHKEGSVICCEVCPRVYHVRCLKLSIEPEGDWFCPEC 160          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: A0A287D143_ICTTR (PHD-type domain-containing protein n=1 Tax=Ictidomys tridecemlineatus TaxID=43179 RepID=A0A287D143_ICTTR)

HSP 1 Score: 72.8 bits (177), Expect = 6.190e-14
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            CW+C  EG +LCC+ C  VYH KCLRL++ P+GDWFCP+C
Sbjct:   93 CWVCHWEGQVLCCELCPWVYHAKCLRLTLEPEGDWFCPEC 132          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: A0A8C6A563_MARMA (Uncharacterized protein n=1 Tax=Marmota marmota marmota TaxID=9994 RepID=A0A8C6A563_MARMA)

HSP 1 Score: 73.9 bits (180), Expect = 7.420e-14
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            CW+C  EG +LCC+ C  VYH KCLRL++ P+GDWFCP+C
Sbjct:  119 CWVCHREGQVLCCELCPRVYHTKCLRLTLEPEGDWFCPEC 158          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: UPI0007628DCD (LOW QUALITY PROTEIN: protein kinase C-binding protein 1-like n=2 Tax=Marmota TaxID=9992 RepID=UPI0007628DCD)

HSP 1 Score: 73.9 bits (180), Expect = 1.780e-13
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            CW+C  EG +LCC+ C  VYH KCLRL++ P+GDWFCP+C
Sbjct:  109 CWVCHREGQVLCCELCPRVYHTKCLRLTLEPEGDWFCPEC 148          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: UPI000FFF98EE (LOW QUALITY PROTEIN: protein kinase C-binding protein 1-like n=1 Tax=Marmota flaviventris TaxID=93162 RepID=UPI000FFF98EE)

HSP 1 Score: 73.2 bits (178), Expect = 3.300e-13
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            CW+C  EG ++CC+ C  VYH KCLRL++ P+GDWFCP+C
Sbjct:  120 CWVCHREGQVICCELCPWVYHAKCLRLTLEPEGDWFCPEC 159          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: A0A817YWD9_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A817YWD9_9BILA)

HSP 1 Score: 71.2 bits (173), Expect = 1.240e-12
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            C+ C +EGD++CCDSC  VYH KCL L+++PDGDW CP+C
Sbjct:   35 CFECHDEGDVICCDSCPRVYHSKCLGLTILPDGDWTCPEC 74          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: A0A817Y8B8_9BILA (Hypothetical protein n=10 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A817Y8B8_9BILA)

HSP 1 Score: 71.2 bits (173), Expect = 1.570e-12
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            C+ C +EGD++CCDSC  VYH KCL L+++PDGDW CP+C
Sbjct:   35 CFECHDEGDVICCDSCPRVYHSKCLGLTILPDGDWTCPEC 74          
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Match: UPI001A9ADD69 (LOW QUALITY PROTEIN: protein kinase C-binding protein 1-like n=1 Tax=Oryx dammah TaxID=59534 RepID=UPI001A9ADD69)

HSP 1 Score: 71.2 bits (173), Expect = 1.580e-12
Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   46 CWICQEEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDC 85
            CW+C +EG +LCC+ C GVYH  CLRL+  P+ DWFCP+C
Sbjct:   91 CWVCHQEGQVLCCELCPGVYHAXCLRLTSEPERDWFCPEC 130          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8209.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKY5_9PHAE4.240e-3059.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4D894_HETAK1.350e-1849.37Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI0003F0836A1.360e-1456.00protein kinase C-binding protein 1-like n=1 Tax=Sa... [more]
A0A287D143_ICTTR6.190e-1462.50PHD-type domain-containing protein n=1 Tax=Ictidom... [more]
A0A8C6A563_MARMA7.420e-1462.50Uncharacterized protein n=1 Tax=Marmota marmota ma... [more]
UPI0007628DCD1.780e-1362.50LOW QUALITY PROTEIN: protein kinase C-binding prot... [more]
UPI000FFF98EE3.300e-1360.00LOW QUALITY PROTEIN: protein kinase C-binding prot... [more]
A0A817YWD9_9BILA1.240e-1262.50Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
A0A817Y8B8_9BILA1.570e-1262.50Hypothetical protein n=10 Tax=unclassified Rotaria... [more]
UPI001A9ADD691.580e-1260.00LOW QUALITY PROTEIN: protein kinase C-binding prot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 45..86
e-value: 7.1E-11
score: 52.1
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 45..85
e-value: 1.1E-8
score: 34.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 43..86
score: 10.184
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 33..86
e-value: 4.9E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR45915:SF6FINGER PROTEIN, PUTATIVE-RELATEDcoord: 42..85
NoneNo IPR availablePANTHERPTHR45915TRANSCRIPTION INTERMEDIARY FACTORcoord: 42..85
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 46..85
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 41..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8209contigC-tenellus_contig8209:2548..5191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8209.1.1mRNA_C-tenellus_contig8209.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8209 2548..5191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8209.1.1 ID=prot_C-tenellus_contig8209.1.1|Name=mRNA_C-tenellus_contig8209.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=86bp
FCLVQKEFPGRNTCELVDRYYGGWKKTEWYVAAKNAIITRKLQSRCWICQ
EEGDLLCCDSCDGVYHLKCLRLSVVPDGDWFCPDCI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD