prot_C-tenellus_contig8206.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8206.1.1
Unique Nameprot_C-tenellus_contig8206.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length283
Homology
BLAST of mRNA_C-tenellus_contig8206.1.1 vs. uniprot
Match: D8LP18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP18_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 2.340e-7
Identity = 63/206 (30.58%), Postives = 91/206 (44.17%), Query Frame = 0
Query:  101 SSERWNMGDGVDELGRLGMEVEP-----LLPPPATWHT-----AGGRFGGWKRGR----------HEQEEWLEFVSRRVQSKVVGGVPRNKSG---EIDGTGEGXXXXXGQHSRVELHRGKGDRSGAPAGIQRGGKSSLGVGTNNDLLAKSGQVEAIGAGDKWRRDTLVEEGCVQEMEERELRQKALAAM-GLARKRQKSQVAGRQ 282
            + +RW M DG  +L   G+E+E       LPPP  W        GG  GG +RGR           E E+WLE VS+RV+S VVG  P    G   E DG G+           V +  G  +  GA   ++ GG         +   + +G V  +G GD                 E ELRQ+ LAAM G ++ + +S+++G++
Sbjct:  980 ADDRWGMNDGAADLAERGVELEGGGAGLYLPPPLDWPPDVSLLPGGAKGG-RRGRKRNRQARAEKEEAEQWLEMVSKRVRSTVVGAAPPGTWGAANEEDGNGDAVAMD------VVVDGGSLNAVGA---VRVGGSEGGANRAPSGAGSATGAVANVGGGDV----------------EAELRQRLLAAMIGRSKSKSRSKLSGKE 1159          
BLAST of mRNA_C-tenellus_contig8206.1.1 vs. uniprot
Match: A0A6H5JML1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML1_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 5.850e-6
Identity = 64/195 (32.82%), Postives = 82/195 (42.05%), Query Frame = 0
Query:  103 ERWNMGDGVDELGRLGMEVEP-----LLPPPATWHTAGGRF-GGWKRGRH------------EQEEWLEFVSRRVQSKVVGGVPRNKSG---EIDGTGEGXXXXXGQHSRVELHRGKGDRSGAPAGIQRGGKSSLGVGTNNDLLAKSGQVEAIGAGDKWRRDTLVEEGCVQEMEERELRQKALAAMGLARKRQKS 276
            +RW M DG  +L   G+E+E       LPPP  W         G K GR             E+ EWLE VS+RV+SKVVG  P    G   E DG G            +++  G G  + A   ++ GG      G N    A +G   A GAG     D            E ELRQ+ LAAM ++R + KS
Sbjct:  136 DRWGMNDGAADLAERGVELEGGGAGLYLPPPPDWPPDASLLPDGAKGGRRXXXRDRQASAEKEEVEWLEMVSKRVRSKVVGAAPPGSWGAANEDDGNGNAVP--------MDVVVGGGSLN-ADGAVRVGGSEG---GANR---APNGAGSATGAGSVGGGDV-----------EAELRQRLLAAM-MSRSKSKS 303          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8206.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP18_ECTSI2.340e-730.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML1_9PHAE5.850e-632.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8206contigC-tenellus_contig8206:843..4978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8206.1.1mRNA_C-tenellus_contig8206.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8206 332..5795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8206.1.1 ID=prot_C-tenellus_contig8206.1.1|Name=mRNA_C-tenellus_contig8206.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=283bp
MEARIELLERRRREMRAQVRVKAAHEKLQMGFERACQMKWKEDGGKGDGR
QHRPLSPTLDLDRWTPPGNLLDTTEDGGGGPRSAVRENSLRSSEVALGVD
SSERWNMGDGVDELGRLGMEVEPLLPPPATWHTAGGRFGGWKRGRHEQEE
WLEFVSRRVQSKVVGGVPRNKSGEIDGTGEGEDEGEGQHSRVELHRGKGD
RSGAPAGIQRGGKSSLGVGTNNDLLAKSGQVEAIGAGDKWRRDTLVEEGC
VQEMEERELRQKALAAMGLARKRQKSQVAGRQ*
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