prot_C-tenellus_contig8203.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig8203.1.1
Unique Name	prot_C-tenellus_contig8203.1.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	451

Homology

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: A0A835ZAM0_9STRA (MI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAM0_9STRA)

HSP 1 Score: 306 bits (785), Expect = 1.020e-91
Identity = 157/194 (80.93%), Postives = 174/194 (89.69%), Query Frame = 0

Query:  258 PKAKANILVDQPATITGRTGGVYVPPFKLAQMQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            P AK NI+  Q   +TGR GGVY+PPFKLAQM+K +  L K +REYQR AWEALRKSINGLINKVN  N+K I PELF+LNLVRGRG+FARA+MK+QLASPGFTPVF+++VAVVNTKLPENGELILKRVIVAFRRA+KRRDK+VATALAKFIAHLVNQQVAHELLALQLLTVLLE PTDDSVEIAV FT+EIGQ
Sbjct:  101 PAAKPNIMTGQAEAMTGRLGGVYIPPFKLAQMRKNVDALDKSSREYQRTAWEALRKSINGLINKVNAANVKNIIPELFELNLVRGRGLFARAIMKSQLASPGFTPVFAAVVAVVNTKLPENGELILKRVIVAFRRAFKRRDKIVATALAKFIAHLVNQQVAHELLALQLLTVLLENPTDDSVEIAVGFTREIGQ 294

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: A0A7S3XKB6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKB6_HETAK)

HSP 1 Score: 281 bits (719), Expect = 1.320e-88
Identity = 143/178 (80.34%), Postives = 162/178 (91.01%), Query Frame = 0

Query:  274 GRTGGVYVPPFKLAQMQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            GRTGGVYVPPFKLA M+++M   GK T+E+QRM+WEALRKSINGLINKVN  NIK + PEL Q NLVRGRG+FARA+MKAQLASPGFT ++++LVAV+NT+LPENGEL+LKRVI AFRRAYKRRDKV ATAL++FIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAV F KE+GQ
Sbjct:    1 GRTGGVYVPPFKLAMMREQMAKQGKHTKEFQRMSWEALRKSINGLINKVNVGNIKNLVPELLQENLVRGRGLFARALMKAQLASPGFTHIYAALVAVINTRLPENGELLLKRVIFAFRRAYKRRDKVTATALSRFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVAFVKEVGQ 178

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: D7FKF9_ECTSI (MI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF9_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 9.690e-88
Identity = 151/163 (92.64%), Postives = 159/163 (97.55%), Query Frame = 0

Query:  289 MQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            MQK+   +GK T+EYQR+AWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRG+FARAVMKAQLASPGFTPVF++LVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAH+VNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ
Sbjct:    1 MQKDAETMGKATKEYQRIAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGLFARAVMKAQLASPGFTPVFAALVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHMVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 163

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: A0A7S2WT31_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT31_9STRA)

HSP 1 Score: 291 bits (746), Expect = 1.640e-87
Identity = 151/198 (76.26%), Postives = 171/198 (86.36%), Query Frame = 0

Query:  256 EKPKAKANILVDQPAT--ITGRTGGVYVPPFKLAQMQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            +KP + A   ++Q A   + GRTGGVY+PPFKLA MQKEM  + K ++EYQR+ WE LRK INGL+NKVN  NIK I PELF+LNLVRG+G+ ARAVMKAQLASPGFT ++S+LVAV+NTKLPENGELI+KRVIV FRRAYKRRDKVVATA AKFIAHLVN QVAHELLALQLLTVLLEEPTDDSVEIAVNFTKE+GQ
Sbjct:  149 DKPSSAAQAFLEQEARQKLGGRTGGVYIPPFKLAAMQKEMAKMDKASKEYQRLKWEQLRKGINGLVNKVNVANIKDIIPELFELNLVRGKGLLARAVMKAQLASPGFTHIYSALVAVLNTKLPENGELIVKRVIVGFRRAYKRRDKVVATAFAKFIAHLVNHQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEVGQ 346

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: A0A7S2MJ10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MJ10_9STRA)

HSP 1 Score: 281 bits (718), Expect = 2.790e-84
Identity = 136/178 (76.40%), Postives = 160/178 (89.89%), Query Frame = 0

Query:  274 GRTGGVYVPPFKLAQMQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            GRTGGVY+PPFKLA MQKEM  + K ++E+QR+ WE LRK INGL+NKVN  NIKM+ PE F+LNL+RGRG+ ARA+MKAQLASPGFT ++++LVAV+NTKLPENGELI+KRVIV FRRAYKRRDKVVATA  KFI HL+NQQV+HEL+ALQLLT+LLE+PTDDSVEIAVNFTKE+GQ
Sbjct:   74 GRTGGVYIPPFKLAAMQKEMSKMNKTSKEFQRLKWEKLRKGINGLVNKVNVANIKMLIPEFFELNLIRGRGLLARAIMKAQLASPGFTHIYAALVAVLNTKLPENGELIMKRVIVGFRRAYKRRDKVVATAFIKFIGHLINQQVSHELIALQLLTILLEDPTDDSVEIAVNFTKEVGQ 251

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: F0Y926_AURAN (Uncharacterized protein Auran_987 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y926_AURAN)

HSP 1 Score: 265 bits (676), Expect = 2.280e-79
Identity = 128/179 (71.51%), Postives = 158/179 (88.27%), Query Frame = 0

Query:  273 TGRTGGVYVPPFKLAQMQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            +GRTGG+YVPPFK+A ++K+   L   +RE+Q+++WE+LRK ING +NKVN +NI+ I PEL +LNLVRGRG+  RA+MKAQLASPGFT ++++L AV+NTKLPENGEL+LKRV+V FRRAYKRRDKVVATA AKF+ HLVN Q+AHEL+ALQLLTVLL+EPTDDSVEIAVNFTKE+GQ
Sbjct:   10 SGRTGGIYVPPFKIAALRKQTAGLDASSREFQKLSWESLRKGINGHVNKVNVSNIRSIVPELLELNLVRGRGLLCRALMKAQLASPGFTHIYAALAAVLNTKLPENGELLLKRVVVGFRRAYKRRDKVVATAFAKFLGHLVNHQIAHELVALQLLTVLLDEPTDDSVEIAVNFTKEVGQ 188

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: I2CP05_NANGC (Pre-mrna-splicing factor cwc-22 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP05_NANGC)

HSP 1 Score: 266 bits (680), Expect = 2.740e-79
Identity = 138/183 (75.41%), Postives = 159/183 (86.89%), Query Frame = 0

Query:  272 ITGRTGGVYVPPFKLAQMQKEMGMLGKK----TREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIG 450
            +TGRTGGVY+PPFKLAQM+ +M   GKK    +++YQRM WEALRKSINGLINKVN +N+  I PELFQ NLVRGRG+F RAVMKAQLASPGFT ++++LVAVVNTKLPE GEL+L+RVI AFRRAYKRRDKVVAT L KFIAHLVNQQVAHE+LALQ++ VLL EPTDDSVEIAV F K++G
Sbjct:    1 MTGRTGGVYIPPFKLAQMRAQMEAEGKKEDKSSKDYQRMTWEALRKSINGLINKVNVSNLAHIVPELFQENLVRGRGLFVRAVMKAQLASPGFTHIYAALVAVVNTKLPEVGELLLRRVIFAFRRAYKRRDKVVATGLVKFIAHLVNQQVAHEILALQIVEVLLGEPTDDSVEIAVAFVKDVG 183

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: A0A8J2SIE4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIE4_9STRA)

HSP 1 Score: 264 bits (675), Expect = 5.070e-78
Identity = 130/178 (73.03%), Postives = 157/178 (88.20%), Query Frame = 0

Query:  274 GRTGGVYVPPFKLAQMQKEMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            GRTGG+YVPPFKLA +++EM    K++ E+QR++WEALRK INGL+NKVN  NI+ I PEL +LNLVRGRG+  RA+MKAQLASPGFT ++++LVAV+NTKLPENGEL+LKRV+V FRRAY+RRDKVVAT  AKF+AHL N QVAHEL+ALQLLTVLL++PTDDSVEIAV FTKE+GQ
Sbjct:   37 GRTGGIYVPPFKLAALRQEMADKDKRSAEFQRLSWEALRKGINGLVNKVNVGNIRSIVPELLELNLVRGRGLLCRALMKAQLASPGFTHIYAALVAVLNTKLPENGELLLKRVLVGFRRAYRRRDKVVATGFAKFLAHLCNHQVAHELVALQLLTVLLDDPTDDSVEIAVQFTKEVGQ 214

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: D0NT75_PHYIT (Nucampholin n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NT75_PHYIT)

HSP 1 Score: 260 bits (665), Expect = 2.460e-76
Identity = 137/204 (67.16%), Postives = 163/204 (79.90%), Query Frame = 0

Query:  249 KTEPKADEKPKAKANILVDQPATITGRTGGVYVPPFKLAQMQKEMGM-LGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            K E   D KP  K  +LVD  A  +GRTGGVY+PPFKLAQ++KE    LG  + E QR  W+ALRKS+NGLINKVN  N+  I PELFQ NLVR RG+ ARA+MKAQLASPGFT ++++LVAV+NTK+PENGEL++KRV+  FRRA+KR DKVVA AL +FIAHLVNQQV HELLAL++LT+LL  PTDDSVE+AVNFTKE GQ
Sbjct:   69 KKEDTPDTKPARKRTLLVD--ARSSGRTGGVYIPPFKLAQLRKEQEKDLGPSSEEMQRRTWDALRKSLNGLINKVNVANLSNILPELFQENLVRARGLLARAIMKAQLASPGFTHIYAALVAVINTKMPENGELLVKRVVFRFRRAFKRGDKVVAIALVRFIAHLVNQQVVHELLALEVLTLLLANPTDDSVEVAVNFTKECGQ 270

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BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Match: A0A662XXK2_9STRA (MI domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXK2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 3.770e-76
Identity = 139/207 (67.15%), Postives = 164/207 (79.23%), Query Frame = 0

Query:  248 EKTEPKADEKPKAKANILVDQPATITGRTGGVYVPPFKLAQMQK---EMGMLGKKTREYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAVMKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKVVATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIGQ 451
            EK E K +  P  K     D P T TGRTGGVY+PPFKLAQ++K   E G L K + E+QR  W+ALRKS+NGLINKVN  NI  I PELFQ NLVR RG+ ARA+MKAQLASPGFT ++++LVAV+NTK+PENGEL++KRV+  FRRA+KR DKVVA AL +FIAHLVNQQV HELLAL++LT+LL  PTDDSVE+AVNFTKE GQ
Sbjct:  104 EKREVKEEAPPPVKRFTFSDDPRT-TGRTGGVYMPPFKLAQLRKQQEEAGGLNKASVEFQRQTWDALRKSLNGLINKVNVANISNILPELFQENLVRARGLLARAIMKAQLASPGFTHIYAALVAVINTKMPENGELVIKRVVHRFRRAFKRGDKVVAIALVRFIAHLVNQQVVHELLALEVLTLLLANPTDDSVEVAVNFTKECGQ 309

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig8203.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZAM0_9STRA	1.020e-91	80.93	MI domain-containing protein n=1 Tax=Tribonema min...	[more]
A0A7S3XKB6_HETAK	1.320e-88	80.34	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
D7FKF9_ECTSI	9.690e-88	92.64	MI domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]
A0A7S2WT31_9STRA	1.640e-87	76.26	Hypothetical protein (Fragment) n=2 Tax=Rhizochrom...	[more]
A0A7S2MJ10_9STRA	2.790e-84	76.40	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
F0Y926_AURAN	2.280e-79	71.51	Uncharacterized protein Auran_987 (Fragment) n=1 T...	[more]
I2CP05_NANGC	2.740e-79	75.41	Pre-mrna-splicing factor cwc-22 n=1 Tax=Nannochlor...	[more]
A0A8J2SIE4_9STRA	5.070e-78	73.03	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
D0NT75_PHYIT	2.460e-76	67.16	Nucampholin n=1 Tax=Phytophthora infestans (strain...	[more]
A0A662XXK2_9STRA	3.770e-76	67.15	MI domain-containing protein (Fragment) n=2 Tax=No...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 267..451 e-value: 1.6E-54 score: 186.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..49
None	No IPR available	PANTHER	PTHR18034:SF3	PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG	coord: 269..451
None	No IPR available	PANTHER	PTHR18034	CELL CYCLE CONTROL PROTEIN CWF22-RELATED	coord: 269..451
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..39
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 40..451
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 22..39
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..21
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 301..449

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig8203	contig	C-tenellus_contig8203:661..3661 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig8203.1.1	mRNA_C-tenellus_contig8203.1.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig8203 661..3979 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig8203.1.1 ID=prot_C-tenellus_contig8203.1.1|Name=mRNA_C-tenellus_contig8203.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=451bp
MSDNRRKRGRSRSPLSSSSSSSSSSSSSSSSSSSSSSSGSNSGSGSRTSM
RSNRKDEEASTPVKDNRREEVNGKSYVPKAPKSSRDIGGGEEAGGVPADD
KPAVRGGNSSMTTDAREDGRGRVVGGKRSGGEGPKGEQQSNGKTDIGRDS
KRRRRSRSRSRSRSREKARKGDDGRRRRRDRSWSGSRGRDRRDRRGKDER
RDGGRANGDTKEGRRGGDDEAKSKVERRRDRSDGGKDRDKGVGRVAEEKT
EPKADEKPKAKANILVDQPATITGRTGGVYVPPFKLAQMQKEMGMLGKKT
REYQRMAWEALRKSINGLINKVNTTNIKMIAPELFQLNLVRGRGVFARAV
MKAQLASPGFTPVFSSLVAVVNTKLPENGELILKRVIVAFRRAYKRRDKV
VATALAKFIAHLVNQQVAHELLALQLLTVLLEEPTDDSVEIAVNFTKEIG
Q

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016021	MIF4-like_sf
IPR016024	ARM-type_fold