prot_C-tenellus_contig8077.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8077.1.1
Unique Nameprot_C-tenellus_contig8077.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length87
Homology
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6NS02_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NS02_TRISU)

HSP 1 Score: 59.3 bits (142), Expect = 2.620e-8
Identity = 28/84 (33.33%), Postives = 46/84 (54.76%), Query Frame = 0
Query:    4 LWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            +W+FD+GCS HMT N + LID    + T + + NG  +    +GN+     +Q       ++  V +VPG+K N+ S+ Q  E+
Sbjct:  381 VWYFDTGCSNHMTGNKSILIDFNKCLNTRIKLANGNFIAAEGMGNV----VIQRSNGKKAVIEKVLYVPGMKCNMMSVGQLLEK 460          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6MLL7_TRISU (Uncharacterized protein n=2 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6MLL7_TRISU)

HSP 1 Score: 58.2 bits (139), Expect = 6.620e-8
Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0
Query:    4 LWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            +W+FD+GCS HMT N + L D    + T + + NG  +    +GN+     +Q       ++  V +VPG+K NL S+ Q  E+
Sbjct:  320 VWYFDTGCSNHMTGNKSILTDFNKCLNTRIKLANGNFIAAEGMGNV----VIQRSNGKKTVIEKVLYVPGMKCNLMSVGQLLEK 399          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6LZT6_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LZT6_TRISU)

HSP 1 Score: 58.2 bits (139), Expect = 6.660e-8
Identity = 28/80 (35.00%), Postives = 43/80 (53.75%), Query Frame = 0
Query:    4 LWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQ 83
            +W+FD GCS HMT N + L D    + T + + NG  + V  +GN+     +Q       ++  V +VPG+K NL S+ Q
Sbjct:  296 VWYFDIGCSNHMTGNKSILTDFNKCLNTRIKLANGNFIAVEGMGNV----VIQRSNGKKAVIEKVLYVPGMKCNLMSVGQ 371          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6NZX7_TRISU (CCHC-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NZX7_TRISU)

HSP 1 Score: 57.8 bits (138), Expect = 9.080e-8
Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 0
Query:    4 LWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            +W+FD+GCS HMT N + L D    + T + + NG  +    +GN+     +Q       ++  V +VPG+K NL S+ Q  E+
Sbjct:  289 VWYFDTGCSNHMTWNKSILTDFNKCLNTRIKLANGNFIAAEGMGNV----VIQRSNGKKAVIKKVLYVPGMKCNLMSVGQLLEK 368          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6N984_TRISU (Integrase catalytic domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6N984_TRISU)

HSP 1 Score: 57.8 bits (138), Expect = 9.100e-8
Identity = 30/88 (34.09%), Postives = 46/88 (52.27%), Query Frame = 0
Query:    1 VDEL-WFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            VD + W+FD+GCS HMT N + L D    + T + + N   +    +GN+     +Q       I+  V +VPG+K NL S+ Q  E+
Sbjct:  304 VDSMVWYFDTGCSNHMTRNKSILTDVNKCLNTRIKLANSNFIAAEGMGNV----VIQRSNGKKAIIEKVLYVPGMKCNLMSVGQLLEK 387          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 57.4 bits (137), Expect = 1.250e-7
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    5 WFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGK-VLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQ 83
            W+FDSGCSAH+T +  A ++       +++  N K ++Q S+IG++ L   V  G  S   + NV +VP L  NL S+ Q
Sbjct:  271 WYFDSGCSAHLTKDKNAFVNETTSATMNISTANRKDIMQTSSIGDVKLPVSVY-GSTSDITVRNVYYVPDLCVNLLSVSQ 349          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A0K8T6E1_LYGHE (gag_pre-integrs domain-containing protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8T6E1_LYGHE)

HSP 1 Score: 56.6 bits (135), Expect = 1.860e-7
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    5 WFFDSGCSAHMTHNPTALID-PEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            W+ DSG + H+T     L +  EP   +SVT  +G+ L ++A+G+  +   +  G+V    + NVS+VPGL++NL S ++ G +
Sbjct:   34 WYIDSGATIHVTGRKDWLTNLREPSTKSSVTTASGEKLPITAVGDTHVLLKI-GGKVKKTPIRNVSYVPGLRYNLISCVELGRK 116          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6NQW5_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NQW5_TRISU)

HSP 1 Score: 56.6 bits (135), Expect = 2.280e-7
Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 0
Query:    4 LWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            +W+FD+GCS HMT N + L D    + T + + NG +     +GN+ +     NG+ +  ++  V +VPG+K NL S+ Q  E+
Sbjct:  273 VWYFDTGCSNHMTGNKSILTDFNKCLNTRIKLANGNLFAAEGMGNVMIHR--SNGKKA--VIEKVLYVPGMKCNLISVGQLLEK 352          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A0A9WQD4_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WQD4_LYGHE)

HSP 1 Score: 56.6 bits (135), Expect = 2.330e-7
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0
Query:    5 WFFDSGCSAHMTHNPTALID-PEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            W+ DSG + H+T     L +  EP   +SVT  +G+ L ++A+G+  +   +  G+V    + NVS+VPGL++NL S ++ G +
Sbjct:  259 WYIDSGATIHVTGRKDWLTNLREPSTKSSVTTASGEKLPITAVGDTHVLLKI-GGKVKKTPIRNVSYVPGLRYNLISCVELGRK 341          
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Match: A0A2Z6NAQ0_TRISU (CCHC-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NAQ0_TRISU)

HSP 1 Score: 55.8 bits (133), Expect = 4.220e-7
Identity = 28/84 (33.33%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    4 LWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLSLSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ 87
            +W+FD+GCS HMT N + L D    + T + + NG  +    +GN+     +Q        +  V +VPG+K NL S+ Q  E+
Sbjct:  286 VWYFDTGCSNHMTGNKSILTDFNKCLNTRIKLANGNFIAAEGMGNV----VIQRSNGKKADIEKVLYVPGMKCNLMSVGQLLEK 365          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8077.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2Z6NS02_TRISU2.620e-833.33Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A2Z6MLL7_TRISU6.620e-833.33Uncharacterized protein n=2 Tax=Trifolium subterra... [more]
A0A2Z6LZT6_TRISU6.660e-835.00Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A2Z6NZX7_TRISU9.080e-833.33CCHC-type domain-containing protein n=1 Tax=Trifol... [more]
A0A2Z6N984_TRISU9.100e-834.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A0A9Z683_LYGHE1.250e-737.50Retrovirus-related Pol polyprotein from transposon... [more]
A0A0K8T6E1_LYGHE1.860e-734.52gag_pre-integrs domain-containing protein (Fragmen... [more]
A0A2Z6NQW5_TRISU2.280e-734.52Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A0A9WQD4_LYGHE2.330e-734.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z6NAQ0_TRISU4.220e-733.33CCHC-type domain-containing protein n=1 Tax=Trifol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8077contigC-tenellus_contig8077:5598..5858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8077.1.1mRNA_C-tenellus_contig8077.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8077 5598..5858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8077.1.1 ID=prot_C-tenellus_contig8077.1.1|Name=mRNA_C-tenellus_contig8077.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=87bp
VDELWFFDSGCSAHMTHNPTALIDPEPVVGTSVTVRNGKVLQVSAIGNLS
LSCCVQNGEVSSFILHNVSFVPGLKFNLFSMIQAGEQ
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