prot_C-tenellus_contig8037.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig8037.1.1
Unique Nameprot_C-tenellus_contig8037.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length166
Homology
BLAST of mRNA_C-tenellus_contig8037.1.1 vs. uniprot
Match: A0A6H5KF53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF53_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.510e-29
Identity = 64/146 (43.84%), Postives = 88/146 (60.27%), Query Frame = 0
Query:    4 RDYCLVTCRLQNSTYLPGEQISGVITFALKDDVEDHVNLVKATVQAHGHVKVDPRWISLPDSVRNLYGQGPGQSFGEN--------------LPRYNSNVADANSACVFFTNAALVLKKERLTK-EESLSFSFSLTLPLGLPPSFK 134
            +D C VTC LQ +T+LPGE + G I F +  + +D V++ +ATVQAHG+VKVDPRWI+LP S+R L+ Q  G   G +              +PRY S + D  SACVF +  A++LK+ER+       SF FS  LP  L P+F+
Sbjct:   24 QDRCRVTCALQRNTFLPGEHVRGTIKFGVSSEDQDGVDIEEATVQAHGYVKVDPRWIALPTSLRRLFRQEEGSGGGASAADGDRKPVDQAFPIPRY-SGLTDDRSACVFASEVAVLLKQERVDGGRHPTSFRFSFVLPENLTPTFR 168          
BLAST of mRNA_C-tenellus_contig8037.1.1 vs. uniprot
Match: D8LDZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ5_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.530e-27
Identity = 66/151 (43.71%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    4 RDYCLVTCRLQNSTYLPGEQISGVITFALKDDVEDHVNLVKATVQAHGHVKVDPRWISLPDSVRNLYGQGPG-------------------QSFGENLPRYNSNVADANSACVFFTNAALVLKKERLTK-EESLSFSFSLTLPLGLPPSFK 134
            +D C VTC LQ +T+LPGE + G I F +  + +D V++ +ATVQAHG+VKVDPRWI+LP S+R L+ Q  G                   Q+F   +PRY S + D  SACVF +  A++LKKER+       SF FS  LP  L P+F+
Sbjct:   24 QDRCRVTCALQRNTFLPGEHVRGTIKFGVSSEDQDGVDIEEATVQAHGYVKVDPRWIALPTSLRRLFRQEEGSGGXXXXXXGADGDRKPVDQAFP--VPRY-SGLTDDRSACVFASEVAVLLKKERVDGGRHPASFRFSFVLPENLTPTFR 171          
BLAST of mRNA_C-tenellus_contig8037.1.1 vs. uniprot
Match: A0A836CMY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 8.760e-14
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    7 CLVTCRLQNSTYLPGEQISGV--ITFALKDDVEDHVNLVKATVQAHGHVKVDPRWISLPDSVRNLYGQGPGQSFGENL--------PRYNSNVADANSACVFFTNAALV 105
            C +TCRL    Y+ GEQ++G   IT    D     + L +A+V+AHGH +VDPRW +LP  +R LY Q   +  G++         PRY  ++ +AN+ C+F T+  ++
Sbjct:   14 CQITCRLHKGNYIGGEQVAGFLSITTPASDGASSALILTQASVRAHGHARVDPRWTNLPKPLRTLYQQDKEEPAGDSSSPSVRRRRPRYK-DLDNANTVCIFSTDCVVL 121          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig8037.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KF53_9PHAE2.510e-2943.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDZ5_ECTSI3.530e-2743.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMY4_9STRA8.760e-1436.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014752Arrestin-like, C-terminalGENE3D2.60.40.640coord: 5..154
e-value: 1.0E-7
score: 34.0
NoneNo IPR availablePANTHERPTHR12507:SF3RAB6A-GEF COMPLEX PARTNER PROTEIN 2coord: 9..134
IPR014848Reduced growth phenotype protein 1PANTHERPTHR12507REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATEDcoord: 9..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig8037contigC-tenellus_contig8037:385..2943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig8037.1.1mRNA_C-tenellus_contig8037.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig8037 385..3013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig8037.1.1 ID=prot_C-tenellus_contig8037.1.1|Name=mRNA_C-tenellus_contig8037.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=166bp
MQLRDYCLVTCRLQNSTYLPGEQISGVITFALKDDVEDHVNLVKATVQAH
GHVKVDPRWISLPDSVRNLYGQGPGQSFGENLPRYNSNVADANSACVFFT
NAALVLKKERLTKEESLSFSFSLTLPLGLPPSFKVRRPGCCGSIQLWVNG
HSNHDLCRTLWSVAHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014752Arrestin-like_C
IPR014848Rgp1