prot_C-tenellus_contig780.7.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig780.7.2
Unique Nameprot_C-tenellus_contig780.7.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length953
Homology
BLAST of mRNA_C-tenellus_contig780.7.2 vs. uniprot
Match: D8LB54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB54_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 6.080e-60
Identity = 130/309 (42.07%), Postives = 176/309 (56.96%), Query Frame = 0
Query:   33 DIFYIDPSMEDAHDLSIRAAKMGIRTRSYLGEGVTVCVTCNKAKKMKESR--------------GRSMGRRRDRIHRMVCQAQSESGARV-----LSLEDRARELEARVETGVAFQRWLGDLECAQ-------------PGSAQVSKGRNLVQGLPRAKHEVREPKVVPRNRFRSPEHPCVVIKDLDGLEADQVQSFPPELRRKCILHNNAPPGICPFTPVEQWDREVSKQKQRRDRLRARNFPARSGMVPPQRSKRGGWCECCKVRFTETEAEHCASDQHRSFMENDANFAALMRFDKMMRVQRQTKV 309
            D FY+DP +E    LS RA ++G +TR +LGEGVT+CV  +      +                G+S G+R  RIHRMV QAQ+ES AR       S+ D+AR+L A V TG  F+ WLG  E  +              G+A   +G+        ++    + +    +RF+S EHP VVIKDLDGLE D+VQ+FPPEL RKC L  +APPGICPFTP EQWDREV K K++  +       AR      Q+ +RGGWCECC++++  T +EHCASD+H + +E D NFAAL+ F+     +  + V
Sbjct:   10 DTFYVDPRVEGCDSLSSRAQRLGFKTRGFLGEGVTICVAASTTPSAGDGGASEGAATPGAAGGVGQSRGQRLSRIHRMVTQAQTESSARPGQQAHTSIVDQARQLRAAVVTGQTFRLWLGRQESKRGAGKGEGGRVTVAAGAAVAGEGKKAADRPLISRRGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLLTDAPPGICPFTPREQWDREVLKVKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPNFAALLAFESWTGAEGDSSV 318          
BLAST of mRNA_C-tenellus_contig780.7.2 vs. uniprot
Match: A0A6H5K9H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9H1_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 2.070e-51
Identity = 129/344 (37.50%), Postives = 175/344 (50.87%), Query Frame = 0
Query:   32 TDIFYIDPSMEDAHDLSIRAAKMGIRTRSYLGEGVTVCVTCNKAKKMKESRGRS----------------MGRRRDRIHRMVCQAQSESGARV-----LSLEDRARELEARVETGVAFQRWLGDLEC-------------AQPGSAQVSKGRNLVQGLPRAKHEVREPKVVPRNRFRSPEHPCVVIKDLDGLEADQVQSFPPELRRKCILHNNAPPGICPFTPVEQ-------------------------WDREVSKQKQRRDRLRARNFPARSGMVPPQRSKRGGWCECCKVRFTETEAEHCASDQHRSFMENDANFAALMRFDKMMRVQRQTKVGKPPVGG 316
            T+ FY+DP +E    LS RA ++G +TR +LGEGVTVCV  +      +                      GRR  RIHRM   AQ+E  A+       S+ D+AR+L A V TG AF+ WLG  E              A  G+A   +G+        ++    + +    +RF+S EHP VVIKDLDGLE D+VQ+FPPEL RKC LH +APPGICPFTP EQ                         WDREV K K++  +       AR      Q+ +RGGWCECC++++  T +EHCASD+H + +E D +FAAL+ F+     +  + V +    G
Sbjct:    3 TETFYVDPRVEGCGSLSSRAQRLGFKTRGFLGEGVTVCVAASTNPAAGDGGASEDAATATAGAVGGARQLRGRRLSRIHRM---AQTEFSAQPGRQTHTSIVDQARQLRATVVTGQAFRLWLGRQESKRGAGRGEGGRVPAAAGAAVAVEGKETADRPLMSRGGGGQQRAAGASRFKSREHPRVVIKDLDGLEPDRVQAFPPELLRKCFLHTDAPPGICPFTPREQASVRRRGAQLGSNSSNGVFVLLEEEWDREVLKMKKKDAQCVGAKVAARMPPAGSQKPRRGGWCECCEIQYIGTMSEHCASDRHTAAVEADPHFAALLAFESWTGAEGDSSVVRDTAPG 343          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig780.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB54_ECTSI6.080e-6042.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9H1_9PHAE2.070e-5137.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 221..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 924..943
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 908..952
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..806
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..480
IPR006572Zinc finger, DBF-typeSMARTSM005863039neucoord: 254..297
e-value: 2.4E-5
score: 33.7
IPR006572Zinc finger, DBF-typePFAMPF07535zf-DBFcoord: 256..294
e-value: 6.7E-12
score: 45.3
IPR006572Zinc finger, DBF-typePROSITEPS51265ZF_DBF4coord: 254..304
score: 13.816
IPR038545DBF-type zinc finger superfamilyGENE3D6.10.250.3410DBF zinc fingercoord: 259..299
e-value: 5.0E-9
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig780contigC-tenellus_contig780:9824..14837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig780.7.2mRNA_C-tenellus_contig780.7.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig780 9244..14881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig780.7.2 ID=prot_C-tenellus_contig780.7.2|Name=mRNA_C-tenellus_contig780.7.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=953bp
MGKVGKMGAPGVEDEMKHDSDLYSDILINRKTDIFYIDPSMEDAHDLSIR
AAKMGIRTRSYLGEGVTVCVTCNKAKKMKESRGRSMGRRRDRIHRMVCQA
QSESGARVLSLEDRARELEARVETGVAFQRWLGDLECAQPGSAQVSKGRN
LVQGLPRAKHEVREPKVVPRNRFRSPEHPCVVIKDLDGLEADQVQSFPPE
LRRKCILHNNAPPGICPFTPVEQWDREVSKQKQRRDRLRARNFPARSGMV
PPQRSKRGGWCECCKVRFTETEAEHCASDQHRSFMENDANFAALMRFDKM
MRVQRQTKVGKPPVGGSDEHGDEVASQGCQGMRELVCISNSECDHEDVKD
EPNCCTSSEEVENGDAETGDCASRVAPRDINHQLEGVDGDYPSRIQRSKK
GMVCIGSWEKETEAGQSEHVVDGGMRTRESEIDLVENGQDCGKSAGCALL
LGRQLQPLNAPTAEGASGSHGDWSPSEQMASGAIAASQLVERYRSRTEVI
SSHGAGVPVCDDNLDTFCDSHPQDSTTPSQHSQEQSSGSKSPVTCHGVQS
LTGNGMANSFYSEGNFCPLAKKKVVPTSLGQSCQHQYSVDHLAENAGFYL
GTTSAKLVNGRFQPQSLVEESVTENKKKSLKRARDVGLTMMVSSMTSQVV
ASGAGQEAFHTSQGIVTPWQQVDKHYRGKEIVVESVGSTLGSSPGFSHSA
QQTAVSGRPTAEKPCQERRSSMRRNVPSLVSDGGSAPTQEASRSITASGV
IPWQKPEKSHSREMCSEVESSVQGNDLSCSGSQSDREESFITRAEGYDGA
SMQTRRERPLFKESSCHLLERRPAALMWQPWQRSMNQSFQKEGVAKGMAN
DWAASNSGVCRWSSPSRLQSMGWQSPGRSQDDIHEERARALSQVVGWQQP
DLGVKYKVQRSVETNSSASHRGKWKTGRYGERGGSRGNRRRQETSRAGSL
VS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006572Znf_DBF
IPR038545Znf_DBF_sf