prot_C-tenellus_contig7521.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7521.4.1
Unique Nameprot_C-tenellus_contig7521.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length64
Homology
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BLAST of mRNA_C-tenellus_contig7521.4.1 vs. uniprot
Match: D8LME5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME5_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 3.300e-18
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0 
Query:    8 PEWALNLSLTWEGAVLEDVELRHDLLGSLLGLPVDLPYAHIRKATLHIPWYTLFLG 63
            PE +L+LSL WEG VL+DVELR D L  LLGLPVD+P+A +R+A LH+PWYTL LG
Sbjct:  191 PESSLDLSLRWEGVVLKDVELRRDFLSELLGLPVDVPHAFVRRAVLHLPWYTLLLG 246
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7521.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LME5_ECTSI3.300e-1867.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13-like, N-terminal domainPFAMPF12624Chorein_Ncoord: 12..61
e-value: 3.1E-8
score: 33.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7521contigC-tenellus_contig7521:6029..6220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7521.4.1mRNA_C-tenellus_contig7521.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7521 6029..6220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7521.4.1 ID=prot_C-tenellus_contig7521.4.1|Name=mRNA_C-tenellus_contig7521.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=64bp
GGGRGREPEWALNLSLTWEGAVLEDVELRHDLLGSLLGLPVDLPYAHIRK
ATLHIPWYTLFLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13-like_N