prot_C-tenellus_contig7480.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7480.1.1
Unique Nameprot_C-tenellus_contig7480.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length202
Homology
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BLAST of mRNA_C-tenellus_contig7480.1.1 vs. uniprot
Match: D8LPS0_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS0_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 6.460e-51
Identity = 106/204 (51.96%), Postives = 134/204 (65.69%), Query Frame = 0 
Query:    2 DVTVAEFGKKCRRLQRVNL----SYCNSFGTHGIVELCTHCPELTRLDLCECKGIEDTALACFHEHRMSALIQVVVNLMNCCNITGVGVQWLADGCPNLISLNVKGTKANLTTLNIISERYPYSRIKVGKKFLGLSPLNRMRERKFIREYFMIYKSASKIQSCYRAMEAKEVVKQRRRCIAELRAAQTIFRAWTRHQGQAYLKV 201
            D  VA F + CRRL+R+ L          G  GI+ +C+ C +L  LDL E   +ED+AL  FH+H+M  L +VV  LM+C  ITG GVQWL  GCP L SLN+KGTKA LT LNII ERYPYSRIKVG KF GLSPL +MRER  I+EY  ++  A KIQ C+R M+A++ V+ RR    E +AA+ + RA  R QG+A L+ 
Sbjct:  435 DAAVASFARGCRRLRRLCLRGVVGVPPPLGAPGILAVCSLCRDLELLDLREVLSLEDSALVGFHDHQMEKLEKVV--LMDCPKITGAGVQWLVAGCPALSSLNLKGTKATLTALNIIKERYPYSRIKVGDKFFGLSPLPKMRERIAIKEYASLHMGARKIQGCFRTMKARKEVRARRVRAQEEKAARMVTRALRRKQGKAKLQA 636
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BLAST of mRNA_C-tenellus_contig7480.1.1 vs. uniprot
Match: A0A7S1U2X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2X0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.230e-22
Identity = 58/149 (38.93%), Postives = 89/149 (59.73%), Query Frame = 0 
Query:   28 TH-GIVELCTHCPELTRLDLCECKGIEDTALACFHEHRMSALIQVVVNLMNCCNITGVGVQWLADGCPNLISLNVKGTKANLTTLNIISERYPYSRIKVGKKFLGLSPLNRMRERKFIREYFMIYKSASKIQSCYRAMEAKEVVKQRRR 175
            TH G+  L   CP+L +L+L  C G+ D A+    E +    ++ + +L NC NI+  G+ W++DG  +L +L+++GT+   T L +I++RY YS +     F GL PL R  +RK I EY  + K+  KIQS YRA +A+E  + RRR
Sbjct:  541 THTGVAYLVAGCPQLDKLNLSGCVGLNDEAMLHLGESQFYPGLRHL-HLTNCTNISDAGLSWMSDGVDSLYTLSLRGTRCTYTALRVIADRYRYSHMVRNANFFGLYPLRRALDRKMINEYGAMIKATIKIQSLYRARKAREKAEMRRR 688
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BLAST of mRNA_C-tenellus_contig7480.1.1 vs. uniprot
Match: A0A835ZCL3_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL3_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.150e-10
Identity = 43/123 (34.96%), Postives = 60/123 (48.78%), Query Frame = 0 
Query:    2 DVTVAEFGKKCRRLQRVNLSYCNSFGTHGIVELCTH-CPELTRLDLCECKGIEDTALACFHEHR-----MSALIQVV---------VNLMNCCNITGVGVQWLADGCPNLISLNVKGTKANLT 109
            D  +    + C RL  +  +   ++G  G+  LC   C  L RLD+  C G+ D A   F          SAL Q +         V+L +C  + GVGVQWLA GCP L++LNV GTK  ++
Sbjct:  686 DALLEGVARGCPRLAALTAARAPAWGVRGMRALCRRLCASLERLDVSGCAGLTDDAFVPFKASADFGGIKSALPQALDHPMLRLRSVSLCDCAGVGGVGVQWLAQGCPALVTLNVHGTKVRVS 808
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7480.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LPS0_ECTSI6.460e-5151.96Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A7S1U2X0_9STRA1.230e-2238.93Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835ZCL3_9STRA3.150e-1034.96WW domain-containing protein n=1 Tax=Tribonema min... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 38..63
e-value: 0.044
score: 22.9
coord: 12..37
e-value: 0.25
score: 20.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..143
e-value: 1.8E-19
score: 71.4
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 152..179
score: 6.595
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 9..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7480contigC-tenellus_contig7480:504..1753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7480.1.1mRNA_C-tenellus_contig7480.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7480 474..1753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7480.1.1 ID=prot_C-tenellus_contig7480.1.1|Name=mRNA_C-tenellus_contig7480.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=202bp
MDVTVAEFGKKCRRLQRVNLSYCNSFGTHGIVELCTHCPELTRLDLCECK
GIEDTALACFHEHRMSALIQVVVNLMNCCNITGVGVQWLADGCPNLISLN
VKGTKANLTTLNIISERYPYSRIKVGKKFLGLSPLNRMRERKFIREYFMI
YKSASKIQSCYRAMEAKEVVKQRRRCIAELRAAQTIFRAWTRHQGQAYLK
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf
IPR000048IQ_motif_EF-hand-BS