prot_C-tenellus_contig7467.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7467.1.1
Unique Nameprot_C-tenellus_contig7467.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length114
Homology
BLAST of mRNA_C-tenellus_contig7467.1.1 vs. uniprot
Match: D8LMY9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMY9_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.050e-40
Identity = 66/108 (61.11%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 MSPGMDVSLFDCLSDPVGLVLSCCCSCVVSAFTRSRLDERECTPFDTCAASAYADRQSLRSKYNMGYAPAPDCLSAMCCQACFTMQTAKELALKKGDEPVWFGDVGAN 108
            MSPGM+ SLFDC SDPVG ++SCCC C V+ FT +R+D+REC   D  + S Y  RQSLR+KY+MG+AP PD +S   C  CF MQ AKE+AL+KGDEPV+FG+VG N
Sbjct:   27 MSPGMETSLFDCFSDPVGCIMSCCCGCFVAGFTAARVDDRECNLCDAFSNS-YQVRQSLRAKYDMGFAPLPDFVSLYFCGCCFIMQNAKEVALQKGDEPVYFGEVGMN 133          
BLAST of mRNA_C-tenellus_contig7467.1.1 vs. uniprot
Match: A0A6U1MVS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MVS5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.140e-33
Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 MSPGMDVSLFDCLSDPVGLVLSCCCSCVVSAFTRSRLDERECTPFDTCAASAYADRQSLRSKYNMGYAPAPDCLSAMCCQACFTMQTAKELALKKGDEPVWFGDVGANIMG 111
            ++PG +  LF C++DP+G VLSCCC  +V+AFT++ ++ERECTP D    SA+  RQ++R+KY++GY    D ++A  C  C   Q A+E+A KKG EPVWFG V  N+ G
Sbjct:   13 LTPGFNEPLFGCMNDPMGCVLSCCCGGIVNAFTQAEVEERECTPCDCLMGSAWFTRQTIRTKYSLGYNEIMDFVAAYFCGCCVVNQMAREVAKKKGKEPVWFGSVKTNLFG 123          
BLAST of mRNA_C-tenellus_contig7467.1.1 vs. uniprot
Match: A0A6H5L3Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y3_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.200e-14
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 MSPGMDVSLFDCLSDPVGLVLSCCCSCVVSAFTRSRLDERECTPFDTCAASAYA 54
            MSPGM+ SLFDC SDPVG ++SCCC C+V+ FT +R+D+REC   D  + S  A
Sbjct:   27 MSPGMETSLFDCFSDPVGCIMSCCCGCIVAGFTAARVDDRECNLCDAFSNSYQA 80          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7467.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMY9_ECTSI2.050e-4061.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6U1MVS5_9STRA4.140e-3348.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5L3Y3_9PHAE3.200e-1457.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006461PLAC8 motif-containing proteinPFAMPF04749PLAC8coord: 8..90
e-value: 8.8E-13
score: 48.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7467contigC-tenellus_contig7467:2280..2879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7467.1.1mRNA_C-tenellus_contig7467.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7467 1634..3427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7467.1.1 ID=prot_C-tenellus_contig7467.1.1|Name=mRNA_C-tenellus_contig7467.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=114bp
MSPGMDVSLFDCLSDPVGLVLSCCCSCVVSAFTRSRLDERECTPFDTCAA
SAYADRQSLRSKYNMGYAPAPDCLSAMCCQACFTMQTAKELALKKGDEPV
WFGDVGANIMGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006461PLAC_motif_containing