prot_C-tenellus_contig7455.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7455.2.1
Unique Nameprot_C-tenellus_contig7455.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length321
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7455.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 85..130
e-value: 9.0E-6
score: 35.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 92..139
score: 10.943
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 45..156
e-value: 2.2E-9
score: 38.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..320
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 117..131
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 92..139
score: 10.496
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 68..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7455contigC-tenellus_contig7455:2711..4702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7455.2.1mRNA_C-tenellus_contig7455.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7455 2670..5066 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7455.2.1 ID=prot_C-tenellus_contig7455.2.1|Name=mRNA_C-tenellus_contig7455.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=321bp
MPSRRKRRKEDGIVSDAVVASSKLIPSNILTSRPSSRVEEVVDDTRKTKT
SLVGRLHRCPPIFNRMSDIIFCASSCSVLALGVETGEKVFALSGHTSNVT
AMVLLPDGLMGGNSPGLLTSSLDKTLRLWDIGDENTPRIESRCRRVLDVG
MPVFHLFLGGVGKSGSEGVILVTKRGTSRLHGLCPKEEDKNAIVPATTPS
SRSEEGEESMVESDDAESVMDSEGEEDDFDDDMSDDEDNLDTDVKECKTS
PGKSKTKAGAGDLDVASSTAPSASKIKDKNKVVMRKRQASKSGRRWKSEG
QGGDGTDWQVSMKTIGGRDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf