prot_C-tenellus_contig7426.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7426.1.2
Unique Nameprot_C-tenellus_contig7426.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length136
Homology
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BLAST of mRNA_C-tenellus_contig7426.1.2 vs. uniprot
Match: A0A6H5KDE4_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE4_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.060e-10
Identity = 33/53 (62.26%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:   19 VRYASYAAIATQRWSRAEGFLRHWLQAMVTMFGAAEVWDIALIQLDLGRVLLK 71
            +RYASYAAIATQ W +A  FL  WL  M  M+GAAEVWDIA +++D G VL K
Sbjct:  375 LRYASYAAIATQSWFKAYSFLSRWLHPMDVMYGAAEVWDIAAMRVDAGLVLDK 427
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7426.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KDE4_9PHAE1.060e-1062.26SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7426contigC-tenellus_contig7426:2029..4329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7426.1.2mRNA_C-tenellus_contig7426.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig7426 921..5300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7426.1.2 ID=prot_C-tenellus_contig7426.1.2|Name=mRNA_C-tenellus_contig7426.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=136bp
MYDTTLRAYSTSFLVPPFVRYASYAAIATQRWSRAEGFLRHWLQAMVTMF
GAAEVWDIALIQLDLGRVLLKKGGADSDAKDAIKLGLNWLWASLGKDCGL
EEEEAALECLNEEQPMSTGTSKGKINVHTQHVHAG*
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