prot_C-tenellus_contig7399.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7399.1.2
Unique Nameprot_C-tenellus_contig7399.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length231
Homology
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: D8LH45_ECTSI (Splicing factor YJU2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH45_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 2.790e-91
Identity = 150/203 (73.89%), Postives = 169/203 (83.25%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLLERSAARRK--------AEAETAAVVDSLVS 195
            MGERKVL KYFPPDFDPKKVPR+KRDP KQI VRMMIPFSMQC TCGEFMYRGKKFNS KEDC GEDYL IR+FRFYIKCVICSQEITFKTDPE GDYELETGA RN E+WT+K+  E E+ + REEE+KSD+MK LENRTLDSKIE+EIMDALDEIK+VNRR+E V+T  +L+ SAARR         A A   A VD++++
Sbjct:    1 MGERKVLCKYFPPDFDPKKVPRLKRDPEKQIGVRMMIPFSMQCNTCGEFMYRGKKFNSLKEDCIGEDYLTIRRFRFYIKCVICSQEITFKTDPEKGDYELETGASRNFESWTDKQATEKEHKEAREEEEKSDNMKQLENRTLDSKIELEIMDALDEIKAVNRRHETVNTEDVLKASAARRNKSVGDKGGAGAGENAEVDAMIA 203          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A835Z1Z4_9STRA (Splicing factor YJU2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z4_9STRA)

HSP 1 Score: 260 bits (664), Expect = 5.070e-83
Identity = 127/177 (71.75%), Postives = 149/177 (84.18%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLLERSA 177
            MGERKVLNKYFPPDFDP K+PRM+R  N Q+EVRMM+PF++QCT C EFMYRGKKFNS+KEDC GEDY GIRKFRFYIKC+ C+QEITFKTDPE+ DYELE GA RN E+W E + AE +    R  EDK+D MKALENRTLDSKIEM+I+DALDEI++VN+R+E VDT+ +LE  A
Sbjct:    1 MGERKVLNKYFPPDFDPSKIPRMRRGKNHQVEVRMMLPFTIQCTVCSEFMYRGKKFNSKKEDCEGEDYKGIRKFRFYIKCITCNQEITFKTDPEHADYELEVGATRNFESWRETEAAETKAVAARAAEDKNDPMKALENRTLDSKIEMDILDALDEIRAVNKRHERVDTAAILESRA 177          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A2D4C0T0_PYTIN (Splicing factor YJU2 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0T0_PYTIN)

HSP 1 Score: 247 bits (631), Expect = 8.760e-79
Identity = 125/177 (70.62%), Postives = 147/177 (83.05%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLLERSA 177
            MGERKVLNKYFPPDFDP  VPR KR  N+QIEVRMM+PFS+QC TCGE+MYRGKKFNSRKED   E+YLGIR FRFYIKCV CS EITFKTDP+NGDY  E G +RN E W EK+ AE+   K+RE+E+K D+MKALENRTLDSK EM+I+DALDEIK++N+R+  +DT  LL++ A
Sbjct:    1 MGERKVLNKYFPPDFDPSIVPRRKRPKNQQIEVRMMLPFSIQCATCGEYMYRGKKFNSRKEDVVEENYLGIRIFRFYIKCVTCSSEITFKTDPKNGDYVAEHGCQRNFEPWREKEAAEEAAMKQREDEEKGDAMKALENRTLDSKREMDILDALDEIKAINQRHAKIDTDQLLQQHA 177          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A8K1C367_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C367_PYTOL)

HSP 1 Score: 245 bits (625), Expect = 7.550e-78
Identity = 123/185 (66.49%), Postives = 146/185 (78.92%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLLERSAARRKAEAE 185
            MGERKVLNKYFPPDFDP  +PR KR  N+QIEVRMM+PFS+QC TCGE+MYRGKKFNSRKED   EDY GIR FRFYIKCV CS EITFKTDP+NGDY  E G +RN E W EK   E+   K++E+E+K D+MK LENRTLDSK EM+I+DALDEIK++N+R+  +DT  LL++ A +   E E
Sbjct:    1 MGERKVLNKYFPPDFDPSIIPRRKRPKNQQIEVRMMLPFSIQCATCGEYMYRGKKFNSRKEDVVEEDYFGIRIFRFYIKCVTCSSEITFKTDPKNGDYVAEHGCQRNFEPWREKDAEEEAALKQKEDEEKGDAMKVLENRTLDSKREMDILDALDEIKAINQRHSKIDTDALLQQHAQKSTLEQE 185          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A6G0XWY7_9STRA (Splicing factor YJU2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWY7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 5.400e-77
Identity = 122/175 (69.71%), Postives = 141/175 (80.57%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLLER 175
            MGERKVLNKYFPPDFDPK +PR +   NKQIEVRMM+PFS+QC  CGEFMY+GKKFNSRKED   EDY GIR +RFYI+C +CS EITFKTDP+NGDY  E G KRN E W E+   E E  K REEE+K DSMKALENRTLDSK EM+I+DALDEIK++N+R+  VDT  LL++
Sbjct:    1 MGERKVLNKYFPPDFDPKLIPRRRMPKNKQIEVRMMLPFSIQCNACGEFMYQGKKFNSRKEDVLDEDYFGIRIYRFYIRCSMCSNEITFKTDPKNGDYATEHGCKRNFEPWRERAADEKEAVKAREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDALLQK 175          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A1W0A1I0_9STRA (Splicing factor YJU2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1I0_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.640e-76
Identity = 120/173 (69.36%), Postives = 142/173 (82.08%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLL 173
            MGERKVLNKYFPPDFDP K+PR K+  NKQIEVRMM+PFS+QC TCGE+MYRGKKFNSRKED   EDY GI+ FRFYI+CV C+ EITFKTDP++GDY  E G +RN E W E +  +++  KEREEE+K DSMK LENRTLDSK EM+I+DALDEIK++N+R+  VDT  LL
Sbjct:    1 MGERKVLNKYFPPDFDPSKIPRRKQPKNKQIEVRMMLPFSIQCATCGEYMYRGKKFNSRKEDVLEEDYHGIKIFRFYIRCVTCASEITFKTDPQHGDYVAEHGCQRNFEPWRENEANDEKMLKEREEEEKGDSMKQLENRTLDSKREMDILDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A024UUI7_9STRA (Splicing factor YJU2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUI7_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.690e-76
Identity = 121/173 (69.94%), Postives = 141/173 (81.50%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLL 173
            MGERKVLNKYFPPDFDP+ +PR K   NKQIEVRMM+PFS+QC TCGEFMY+GKKFNSRKED   EDY G++ FRFYI+C +CS EITFKTDP+NGDY  E G KRN E W E++  E    KEREEE+K DSMKALENRTLDSK EM+I+DALDEIK++N+R+  VDT  +L
Sbjct:    1 MGERKVLNKYFPPDFDPRLIPRRKIPKNKQIEVRMMLPFSIQCNTCGEFMYQGKKFNSRKEDVLDEDYFGVKIFRFYIRCSMCSSEITFKTDPKNGDYATEHGCKRNFEQWREREADEAAILKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDAIL 173          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A1V9Y4X5_9STRA (Splicing factor YJU2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4X5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.290e-76
Identity = 120/173 (69.36%), Postives = 142/173 (82.08%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLL 173
            MGERKVLNKYFPPDFDP  +PR K+  N QIEVRMM+PFS+QC+TCGE+MYRGKKFNSRKED   EDY GI+ FRFYI+C+ C+ EITFKTDP++GDY  E G +RN E W EK   E++  KEREEE+K DSMKALENRTLDSK EM+I+DALDEIK++N+R+  VDT  LL
Sbjct:    1 MGERKVLNKYFPPDFDPSLIPRRKQPKNMQIEVRMMLPFSIQCSTCGEYMYRGKKFNSRKEDVLEEDYHGIKIFRFYIRCITCASEITFKTDPQHGDYVAEHGCQRNFEPWREKDADEEKMLKEREEEEKGDSMKALENRTLDSKREMDILDALDEIKAINQRHAKVDTDALL 173          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: A0A485KX06_9STRA (Splicing factor YJU2 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KX06_9STRA)

HSP 1 Score: 240 bits (612), Expect = 5.120e-76
Identity = 120/175 (68.57%), Postives = 142/175 (81.14%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLLER 175
            MGERKVLNKYFPPDFDP+ +PR K   NKQIEVRMM+PFS+QC  CGEFMY+GKKFNSRKED   EDY G++ FRFYI+C +CS EITFKTDP+NGDY  E G KRN EAW +++       KEREEE+K DSMKALENRTLDSK EM+I+DALDEIK++N+R+  VDT  LL++
Sbjct:    1 MGERKVLNKYFPPDFDPRLIPRRKIPKNKQIEVRMMLPFSIQCNACGEFMYQGKKFNSRKEDVLDEDYFGVKIFRFYIRCSMCSNEITFKTDPKNGDYATEHGCKRNFEAWRDREADAQAVLKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDALLQK 175          
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Match: W4H735_9STRA (Splicing factor YJU2 n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H735_9STRA)

HSP 1 Score: 239 bits (611), Expect = 6.010e-76
Identity = 120/173 (69.36%), Postives = 140/173 (80.92%), Query Frame = 0
Query:    1 MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFMYRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYELETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEIMDALDEIKSVNRRNEHVDTSVLL 173
            MGERKVLNKYFPPDFDP+ +PR K   NKQIEVRMM+PFS+QC  CGEFMY+GKKFNSRKED   EDY G++ FRFYI+C +CS EITFKTDP+NGDY  E G KRN E W E++  E    KEREEE+K DSMKALENRTLDSK EM+I+DALDEIK++N+R+  VDT  +L
Sbjct:    1 MGERKVLNKYFPPDFDPRLIPRRKIPKNKQIEVRMMLPFSIQCNACGEFMYQGKKFNSRKEDVMDEDYFGVKIFRFYIRCSMCSNEITFKTDPKNGDYATEHGCKRNFEQWREREADEAAILKEREEEEKGDSMKALENRTLDSKREMDIIDALDEIKAINQRHAKVDTDAIL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7399.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH45_ECTSI2.790e-9173.89Splicing factor YJU2 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z1Z4_9STRA5.070e-8371.75Splicing factor YJU2 n=1 Tax=Tribonema minus TaxID... [more]
A0A2D4C0T0_PYTIN8.760e-7970.62Splicing factor YJU2 n=2 Tax=Pythium insidiosum Ta... [more]
A0A8K1C367_PYTOL7.550e-7866.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XWY7_9STRA5.400e-7769.71Splicing factor YJU2 n=1 Tax=Aphanomyces euteiches... [more]
A0A1W0A1I0_9STRA1.640e-7669.36Splicing factor YJU2 n=1 Tax=Thraustotheca clavata... [more]
A0A024UUI7_9STRA1.690e-7669.94Splicing factor YJU2 n=1 Tax=Aphanomyces invadans ... [more]
A0A1V9Y4X5_9STRA3.290e-7669.36Splicing factor YJU2 n=1 Tax=Achlya hypogyna TaxID... [more]
A0A485KX06_9STRA5.120e-7668.57Splicing factor YJU2 n=2 Tax=Aphanomyces TaxID=100... [more]
W4H735_9STRA6.010e-7669.36Splicing factor YJU2 n=5 Tax=Aphanomyces astaci Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..138
NoneNo IPR availablePANTHERPTHR12111:SF1SPLICING FACTOR YJU2coord: 1..186
IPR007590Saf4/Yju2 proteinPFAMPF04502DUF572coord: 9..185
e-value: 3.5E-69
score: 233.9
IPR007590Saf4/Yju2 proteinPANTHERPTHR12111SPLICING FACTOR YJU2coord: 1..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7399contigC-tenellus_contig7399:966..2773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7399.1.2mRNA_C-tenellus_contig7399.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig7399 124..3689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7399.1.2 ID=prot_C-tenellus_contig7399.1.2|Name=mRNA_C-tenellus_contig7399.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=231bp
MGERKVLNKYFPPDFDPKKVPRMKRDPNKQIEVRMMIPFSMQCTTCGEFM
YRGKKFNSRKEDCHGEDYLGIRKFRFYIKCVICSQEITFKTDPENGDYEL
ETGAKRNSEAWTEKKKAEDENAKEREEEDKSDSMKALENRTLDSKIEMEI
MDALDEIKSVNRRNEHVDTSVLLERSAARRKAEAETAAVVDSLVSQPCRL
LLERTPYCKTKRLLYRAMFKQTVPICTFTA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007590Saf4/Yju2