prot_C-tenellus_contig739.9.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig739.9.1
Unique Nameprot_C-tenellus_contig739.9.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length70
Homology
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BLAST of mRNA_C-tenellus_contig739.9.1 vs. uniprot
Match: D8LHA9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHA9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.540e-27
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0 
Query:    1 MTTVLWHKLPFRKFIFHELKRDGCRPFMIGLGVAFFTFGVYPAMGLTDEDRKNSVYYQQRMRTMVYSDH 69
            M  V WHKLP+R+ I HE++RDG +PF IG+G++ F  GV P++G TDEDRKNSVYYQQRMRTM Y DH
Sbjct:    1 MPPVHWHKLPWRQLISHEIRRDGFKPFFIGMGISAFLCGVVPSIGFTDEDRKNSVYYQQRMRTMKYEDH 69
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig739.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHA9_ECTSI1.540e-2765.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig739contigC-tenellus_contig739:10836..11622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig739.9.1mRNA_C-tenellus_contig739.9.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig739 10836..11622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig739.9.1 ID=prot_C-tenellus_contig739.9.1|Name=mRNA_C-tenellus_contig739.9.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=70bp
MTTVLWHKLPFRKFIFHELKRDGCRPFMIGLGVAFFTFGVYPAMGLTDED
RKNSVYYQQRMRTMVYSDH*
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