prot_C-tenellus_contig731.8.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig731.8.1
Unique Nameprot_C-tenellus_contig731.8.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length235
Homology
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BLAST of mRNA_C-tenellus_contig731.8.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.110e-7
Identity = 53/195 (27.18%), Postives = 83/195 (42.56%), Query Frame = 0 
Query:    1 MGLLALILSSLLWVISTPVLVWDHLQKQERSCFGRSSIRQGLTFELIT-----AIFRVIVWMMASII-CTAAMGIVMPILYT------LLWLRGVLSIFQWYNWSSTRNMSSTEGGPLGTDC-----AREMWSDWD-------KAKNISARCFLKETSQFDIRPFLQRTTGLKLENLLECIEDPFKVKDGNLWED 171
            MGL+A+ L++LLWV+S P + W  +              +  TF  +        FR  +W+   II C  A+G  + +         +LWLRGV ++F+W +W  +       G      C      +E  S+W        KA+N   R    ++  F + P LQ TTGL +E      ++ F  K+   W D
Sbjct: 1387 MGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPDEVETFLSVRLRDKKGKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGRFVSGETKKGTCPTAMPGQERGSNWRHAWKYVAKARNFRIR-HEHDSEHFHVAPLLQATTGLDMEQFCLLAKEKFNDKNQEHWAD 1580
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig731.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JB40_9PHAE1.110e-727.18Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..45
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig731contigC-tenellus_contig731:12619..14799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig731.8.1mRNA_C-tenellus_contig731.8.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig731 11699..15365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig731.8.1 ID=prot_C-tenellus_contig731.8.1|Name=mRNA_C-tenellus_contig731.8.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=235bp
MGLLALILSSLLWVISTPVLVWDHLQKQERSCFGRSSIRQGLTFELITAI
FRVIVWMMASIICTAAMGIVMPILYTLLWLRGVLSIFQWYNWSSTRNMSS
TEGGPLGTDCAREMWSDWDKAKNISARCFLKETSQFDIRPFLQRTTGLKL
ENLLECIEDPFKVKDGNLWEDEGKNQGLTVEHLRQYRGYAHQDLKDEVNR
ALMLLIRDKNTDDKLQPDTSCPSRIEGTATASLR*
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