prot_C-tenellus_contig7225.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7225.1.1
Unique Nameprot_C-tenellus_contig7225.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length104
Homology
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: D7G6S7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6S7_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.440e-29
Identity = 54/70 (77.14%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 MAAEVKGQEAQDVEMSDGPGNGAGSQGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            MAAE KGQE QDV M +         GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    1 MAAETKGQEPQDVVMGESGKGPEPGIGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 70          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A7S3PD50_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD50_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.190e-24
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 0
Query:   10 AQDVEMSDGPGNGAGSQGQVA------PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            A+DVEMSD P   +  + + A      PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    6 AKDVEMSDAPAEDSKEESKPAAKDPNAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 72          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A7S2Y0P1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0P1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.740e-24
Identity = 49/70 (70.00%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    1 MAAEVKGQEAQDVEMSDGPGNGAGSQGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            MAAE KG+   DVEM D        +    PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    1 MAAETKGET--DVEMLDA------KESSNVPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 62          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A1E7FMU3_9STRA (Ring-box protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMU3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.330e-22
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0
Query:   27 GQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            G  APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:   26 GSAAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 69          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A6U3THL3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3THL3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.210e-22
Identity = 45/62 (72.58%), Postives = 48/62 (77.42%), Query Frame = 0
Query:   12 DVEMSDGPGNGAG---SQGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            DVEMSD   +      S+    PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:   14 DVEMSDAAASEPKKKPSKALAPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 75          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A7S2JW64_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JW64_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.460e-22
Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0
Query:   11 QDVEMSDGPGNGA--GSQGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            +DV+M+D P +        + APRFEIKKW AVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    5 EDVKMADAPVDTKKPAKSAKAAPRFEIKKWTAVAMWSWDICADTCAICRNSLNEPSIEYQAN 66          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A7S0FNC3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNC3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.670e-22
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    8 QEAQDVEMSDGPGNGAGSQGQVA-----PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            +E +DV+M+D     A  + +       PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    2 EETKDVDMADASAPAAEGEAKXXXXXXXPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 69          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A7S2S966_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S966_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.890e-22
Identity = 45/65 (69.23%), Postives = 48/65 (73.85%), Query Frame = 0
Query:   12 DVEMSDGPGNGAGSQG------QVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            DV+M D   N A  +       Q  PRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    8 DVDMVDASANSAIKKAKPTKAPQPPPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 72          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: B8C3J2_THAPS (RING-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3J2_THAPS)

HSP 1 Score: 92.4 bits (228), Expect = 4.680e-22
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
Query:   25 SQGQVAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
            S+   APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:   20 SRPTTAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 65          
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Match: A0A1Z5J6S6_FISSO (RING-box protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6S6_FISSO)

HSP 1 Score: 92.0 bits (227), Expect = 6.450e-22
Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 0
Query:   13 VEMSDGPGNGAGSQGQV----APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQVS 70
             E++D P   A  Q  +    APRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQ +
Sbjct:    2 AEVADVPMEDASEQQVLSKPSAPRFEIKKWNAVAMWSWDICADTCAICRNSLNEPSIEYQAN 63          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7225.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6S7_ECTSI1.440e-2977.14RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S3PD50_9STRA2.190e-2470.15Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2Y0P1_9STRA4.740e-2470.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E7FMU3_9STRA1.330e-2290.91Ring-box protein n=1 Tax=Fragilariopsis cylindrus ... [more]
A0A6U3THL3_9STRA2.210e-2272.58Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2JW64_9STRA2.460e-2269.35Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S0FNC3_9STRA2.670e-2264.71Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2S966_9STRA2.890e-2269.23Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B8C3J2_THAPS4.680e-2286.96RING-type domain-containing protein n=1 Tax=Thalas... [more]
A0A1Z5J6S6_FISSO6.450e-2270.97RING-box protein 1 n=2 Tax=Fistulifera solaris Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024991Anaphase-promoting complex subunit 11, RING-H2 fingerPFAMPF12861zf-ANAPC11coord: 33..62
e-value: 1.2E-5
score: 25.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 21..95
e-value: 5.5E-9
score: 38.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR11210:SF53RING-BOX 1coord: 21..59
NoneNo IPR availablePANTHERPTHR11210RING BOXcoord: 21..59
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 31..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7225contigC-tenellus_contig7225:4883..6230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7225.1.1mRNA_C-tenellus_contig7225.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7225 4337..6777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7225.1.1 ID=prot_C-tenellus_contig7225.1.1|Name=mRNA_C-tenellus_contig7225.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=104bp
MAAEVKGQEAQDVEMSDGPGNGAGSQGQVAPRFEIKKWNAVAMWSWDICA
DTCAICRNSLNEPSIEYQVSDALGQFVLVSLSALLVPAPVVSCLSPCPGW
WLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024991RING-H2_APC11
IPR013083Znf_RING/FYVE/PHD