prot_C-tenellus_contig7112.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7112.2.1
Unique Nameprot_C-tenellus_contig7112.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length335
Homology
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BLAST of mRNA_C-tenellus_contig7112.2.1 vs. uniprot
Match: D8LR38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR38_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.550e-6
Identity = 63/212 (29.72%), Postives = 101/212 (47.64%), Query Frame = 0 
Query:  118 LTAEQKRELRSMKSHEIYIKRKHMEQQPLIEKARDLEGKRIEIYDGTANVWRKMEVSSVTAKWIENNT------VVRI--SYDLQPFDDSWNPVGPKVEVALDQVRWTMLSAGPDNTQMQELTDQGFAKTTAII--SKAENKLSQLRGVFEREKHALEKERK-TEDAAAKMVH------DTIIQKTKASCLAESTILAAKDEKTVEVPSLHR 312
            L  +++R +RSMKS + Y+KRK   QQ  I +A  + G++IEI+DG ANVWR + ++SV  +W++  T      VVR+  + + +P ++             +QV     S G D  +      +G  +  ++   S+A      L  V   E     KERK +   AAK+        D ++QKT      E  +LA + E   EV +L +
Sbjct: 1144 LPPDERRLIRSMKSKDGYLKRKRDAQQHRIAEAEAMVGRKIEIFDGAANVWRTVVIASVCVRWVDLGTKLVLRHVVRVLGAEEDEPDNNRTESENETRGQGNNQVEGRRKSDGGDGDRXXXXGSRGGGRDNSVAPRSRAATAEVDLNEVRWAEYTGRPKERKPSRSNAAKLAEFKVSGSDAVLQKT------EKALLALQHELGEEVQALKK 1349
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7112.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR38_ECTSI1.550e-629.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7112contigC-tenellus_contig7112:2002..5872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7112.2.1mRNA_C-tenellus_contig7112.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7112 1277..5990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7112.2.1 ID=prot_C-tenellus_contig7112.2.1|Name=mRNA_C-tenellus_contig7112.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=335bp
MQMHCIDACSKQVSQLGLSNVIRTSSPLHECIYIAPSNGETDVAQGFAHS
AQGRGVLTFATFNQQKLPSILCQQFRAAEGYGSGETKTGQSLTLDCSRLA
SSPPKVTNKKVKALLKDLTAEQKRELRSMKSHEIYIKRKHMEQQPLIEKA
RDLEGKRIEIYDGTANVWRKMEVSSVTAKWIENNTVVRISYDLQPFDDSW
NPVGPKVEVALDQVRWTMLSAGPDNTQMQELTDQGFAKTTAIISKAENKL
SQLRGVFEREKHALEKERKTEDAAAKMVHDTIIQKTKASCLAESTILAAK
DEKTVEVPSLHRAYLSKWKLYITLPQGVQATNLS*
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