prot_C-tenellus_contig7101.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7101.2.1
Unique Nameprot_C-tenellus_contig7101.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length393
Homology
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: D7FRT4_ECTSI (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT4_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 8.500e-29
Identity = 66/91 (72.53%), Postives = 76/91 (83.52%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLEEQ 393
            QPP +YM MTVEEIVNSWN +L+QDA  FTNEAVKVS+WD  LR+ Q EL +LADDVQKLVLGQQDL R+MK I GEQ+ LD+TL+QLE Q
Sbjct:  156 QPPEQYMNMTVEEIVNSWNVELDQDATTFTNEAVKVSDWDGVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQ 246          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A6H5JT70_9PHAE (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT70_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 2.780e-24
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 0
Query:  310 TMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLEEQ 393
            TMTVEEIVNSWN +L+QDA  FTNEAVKVS+WD  LR+ Q EL +LADDVQKLVLGQQDL R+MK I GEQ+ LD+TL+QLE Q
Sbjct:  319 TMTVEEIVNSWNVELDQDATTFTNEAVKVSDWDVVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQ 402          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A1V9Z874_9STRA (Nuclear pore glycoprotein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z874_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.930e-16
Identity = 48/89 (53.93%), Postives = 66/89 (74.16%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            QPPAEY+  TVE+I+N W++QLE  AM FTNEAV+VS WD  L +NQ++L +LA DV++L + Q++L  N+  I+  Q +LD TLE LE
Sbjct: 1285 QPPAEYLGKTVEDIINMWSEQLENHAMAFTNEAVRVSHWDTELMENQKKLGDLAIDVRRLQMAQKELNANLDTISAYQMELDSTLENLE 1373          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A8K1CMM0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMM0_PYTOL)

HSP 1 Score: 90.9 bits (224), Expect = 3.390e-16
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            QPPA+YM  T+EEI+N W++QLE++A  FTNEAVKVS+WD  L D+Q++L  LA DV+++ + Q++L+ N+  I   Q +L  TLEQLE
Sbjct:  322 QPPADYMGKTIEEIINMWSEQLERNADTFTNEAVKVSQWDGELMDSQKKLGELASDVRRIQVAQKELDTNLDTIFAYQMELKSTLEQLE 410          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A067BGQ9_SAPPC (Nsp1_C domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BGQ9_SAPPC)

HSP 1 Score: 86.3 bits (212), Expect = 2.570e-15
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 0
Query:  305 PAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            PAEY   TVE+I+N W++QLE  AM FTNEAV+VS WD  L +NQ++L +LA DV++L + Q++L  N+  I+  Q +LD TLE LE
Sbjct:  114 PAEYKDKTVEDIINMWSEQLENHAMAFTNEAVRVSHWDAELMENQKKLGDLAIDVRRLQMAQKELNANLDTISAYQLELDATLETLE 200          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A484E958_BRELC (Nsp1_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E958_BRELC)

HSP 1 Score: 87.4 bits (215), Expect = 3.520e-15
Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  304 PPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            PPAEYM  TVE+I+NSW++QLE++A  FT EAVKVS+WD  + D+Q++L +LA DV+++ + Q +L+ N+  I   Q +L  TLEQLE
Sbjct:  244 PPAEYMGRTVEDIINSWSEQLERNADTFTTEAVKVSQWDSDVLDSQRKLGDLAGDVRRIQVAQNELDSNLDTIFAYQMELKSTLEQLE 331          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A6A3WIJ5_9STRA (Nsp1_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WIJ5_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.220e-15
Identity = 44/89 (49.44%), Postives = 67/89 (75.28%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            +PPAEYM  T+E+I+N+W++QLE++A  FT EAVKVS+WD  L D+Q++L ++A DV+++ + Q +L+ N+  I   Q +L  TLEQLE
Sbjct:  263 KPPAEYMGRTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRQLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLE 351          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: G4Z9S7_PHYSP (Nsp1_C domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9S7_PHYSP)

HSP 1 Score: 87.0 bits (214), Expect = 6.570e-15
Identity = 44/89 (49.44%), Postives = 67/89 (75.28%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            +PPAEYM  T+E+I+N+W++QLE++A  FT EAVKVS+WD  L D+Q++L ++A DV+++ + Q +L+ N+  I   Q +L  TLEQLE
Sbjct:  332 KPPAEYMGRTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRQLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLE 420          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A225WLQ3_9STRA (Nuclear pore glycoprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLQ3_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.890e-15
Identity = 44/89 (49.44%), Postives = 67/89 (75.28%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            +PPAEYM  T+E+I+N+W++QLE++A  FT EAVKVS+WD  L D+Q++L ++A DV+++ + Q +L+ N+  I   Q +L  TLEQLE
Sbjct:  259 KPPAEYMGRTIEDIINTWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDSNLDTIFAYQMELKSTLEQLE 347          
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Match: A0A2P4XQD6_9STRA (Nuclear pore glycoprotein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQD6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.930e-15
Identity = 44/89 (49.44%), Postives = 67/89 (75.28%), Query Frame = 0
Query:  303 QPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLE 391
            +PPAEYM  T+E+I+N+W++QLE++A  FT EAVKVS+WD  L D+Q++L ++A DV+++ + Q +L+ N+  I   Q +L  TLEQLE
Sbjct:  295 KPPAEYMGKTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLE 383          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7101.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRT4_ECTSI8.500e-2972.53Nsp1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JT70_9PHAE2.780e-2473.81Nsp1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9Z874_9STRA1.930e-1653.93Nuclear pore glycoprotein n=1 Tax=Thraustotheca cl... [more]
A0A8K1CMM0_PYTOL3.390e-1652.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067BGQ9_SAPPC2.570e-1552.87Nsp1_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A484E958_BRELC3.520e-1552.27Nsp1_C domain-containing protein n=1 Tax=Bremia la... [more]
A0A6A3WIJ5_9STRA5.220e-1549.44Nsp1_C domain-containing protein n=4 Tax=Phytophth... [more]
G4Z9S7_PHYSP6.570e-1549.44Nsp1_C domain-containing protein n=1 Tax=Phytophth... [more]
A0A225WLQ3_9STRA6.890e-1549.44Nuclear pore glycoprotein n=1 Tax=Phytophthora meg... [more]
A0A2P4XQD6_9STRA7.930e-1549.44Nuclear pore glycoprotein n=2 Tax=Phytophthora pal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 373..393
NoneNo IPR availableGENE3D1.20.5.170coord: 339..393
e-value: 2.0E-8
score: 36.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..306
IPR007758Nucleoporin, NSP1-like, C-terminalPFAMPF05064Nsp1_Ccoord: 304..393
e-value: 7.5E-14
score: 51.5
IPR026010Nucleoporin NSP1/NUP62PANTHERPTHR12084NUCLEAR PORE GLYCOPROTEIN P62-RELATEDcoord: 4..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7101contigC-tenellus_contig7101:2244..6280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7101.2.1mRNA_C-tenellus_contig7101.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7101 2244..6447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7101.2.1 ID=prot_C-tenellus_contig7101.2.1|Name=mRNA_C-tenellus_contig7101.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=393bp
MFSGFKAPSGGTGGFNFVSTTTPTSAAAPAPATPSFGFGAGAAGSAPATS
GSTGGLFGSASAATPAPAPAASGFSFGGSTAATNPASSAASAASGSSQFS
FGAQAAPTTTATPATAPLFGAQAPAPTPSSGSSFAFSSLAPAPAASQASG
SAPAPVPAASAPAPATNTFSFGGLAPVPAPASTGAAAAPAGGFSFTTPAP
APAPTTTVAPPAAAPAPAATPAAAPAGSGRFLFGGSLGATVSTSTTTAAP
APAAGGGGFSFSGAGGASAAPAAAPGAGALALAPAPGGASNAQQGQQQAE
QEQPPAEYMTMTVEEIVNSWNDQLEQDAMIFTNEAVKVSEWDKALRDNQQ
ELTNLADDVQKLVLGQQDLERNMKVIAGEQNQLDRTLEQLEEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007758Nucleoporin_NSP1_C
IPR026010NSP1/NUP62