prot_C-tenellus_contig6924.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6924.4.1
Unique Nameprot_C-tenellus_contig6924.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length185
Homology
BLAST of mRNA_C-tenellus_contig6924.4.1 vs. uniprot
Match: D8LE02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE02_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.180e-23
Identity = 63/117 (53.85%), Postives = 74/117 (63.25%), Query Frame = 0
Query:   66 SFRAATRAYGAVGDDVLSDVFGKVTIRFRGATVQLQAMKAEEGREGAGQEAADGNEADGEMSGFGKVERLGPARAGPMLKGGLVKKHTFQPPAQRVTQGSLLGLDKLAAQKRGEKEA 182
            +FR A + YGA+GD +LSDVFGKVT R RG+ VQLQAM+              G      ++GFGK ERL    AG  LKG  VK+H FQ PA R  QGSLLGLDKLAAQK  E++A
Sbjct:   99 AFRTAAKGYGALGDSLLSDVFGKVTTRLRGSLVQLQAMQEXXXXXXXXXXXXXG------LAGFGKAERLSRGGAGRALKGVFVKRHPFQAPAPRTQQGSLLGLDKLAAQKNAERQA 209          
BLAST of mRNA_C-tenellus_contig6924.4.1 vs. uniprot
Match: A0A6H5KS63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS63_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.630e-15
Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   66 SFRAATRAYGAVGDDVLSDVFGKVTIRFRGATVQLQAMKAEEGREGAGQEAADGNEADGEMSGFGKVERLGPARAGPMLKGGLVKKHTFQ 155
            +FR A + YGA+GD +LSDVFGKVT R RG+ VQLQAM+              G      ++GFGK ERL    AG  LKGGLVK+HTFQ
Sbjct:  104 AFRTAAKGYGALGDSLLSDVFGKVTTRLRGSLVQLQAMQEXXXXXXXXXXXXXG------LAGFGKAERLSRGGAGRALKGGLVKRHTFQ 187          
BLAST of mRNA_C-tenellus_contig6924.4.1 vs. uniprot
Match: A0A7S2SH89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SH89_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.780e-9
Identity = 66/189 (34.92%), Postives = 93/189 (49.21%), Query Frame = 0
Query:    9 RARERVRDDGVLVADVASIVSVSLGLTKPNRTLGRNVVIAALDAHIAATGSQG---GGLDSFRAATRAYGAVGDDVLSDVFGKVTIRFRGATVQLQAMKAEEGREGAGQEAADGNEADGEMSGFGKVERLGPARAGPMLKGGLVKK------HTFQPPA------QRVTQGSLLGLDKLAAQKRGEKEA 182
            RARE + +DGVLV +VAS V+ +L L   N+TLGR +V  A+DA   A  ++    G    F  A   +G++  D+L D+F KV  R    T  +  +K++            G       +  G +E+       P LKGGL++K       T  P A      ++   GSLLGLDKLA QKR +K A
Sbjct:   12 RAREAMVNDGVLVGEVASQVAGALALPAVNKTLGRKIVSLAVDALEKADQAEEAAEGQFPGFVEAASQFGSLARDLLRDLFDKVGER---RTRCINTIKSK------------GKPMPSTTAEGGVIEQF----VAPKLKGGLLRKPGAGAVFTKAPQADGDKAEKKGGVGSLLGLDKLARQKRAQKAA 181          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6924.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE02_ECTSI1.180e-2353.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS63_9PHAE1.630e-1552.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SH89_9STRA1.780e-934.92Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6924contigC-tenellus_contig6924:4468..5742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6924.4.1mRNA_C-tenellus_contig6924.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6924 4312..5742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6924.4.1 ID=prot_C-tenellus_contig6924.4.1|Name=mRNA_C-tenellus_contig6924.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=185bp
MVDKDTIDRARERVRDDGVLVADVASIVSVSLGLTKPNRTLGRNVVIAAL
DAHIAATGSQGGGLDSFRAATRAYGAVGDDVLSDVFGKVTIRFRGATVQL
QAMKAEEGREGAGQEAADGNEADGEMSGFGKVERLGPARAGPMLKGGLVK
KHTFQPPAQRVTQGSLLGLDKLAAQKRGEKEALAG
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