prot_C-tenellus_contig6898.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6898.1.1
Unique Nameprot_C-tenellus_contig6898.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length360
Homology
BLAST of mRNA_C-tenellus_contig6898.1.1 vs. uniprot
Match: D7FT62_ECTSI (ARL13, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT62_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.820e-75
Identity = 176/418 (42.11%), Postives = 230/418 (55.02%), Query Frame = 0
Query:    8 LENGGSGLAGVRHLRDNREWRRRARTE---RSKTTDSI-------------------KAPLGSPRQRRRIEDTHSYLCAKVDPIMGLLITYLISERPNDVQSAMLGYLLARREGLFLGCGSARDGDI-----------MPIVGSDCTFERGSKKYRHKVGERLTKHEDRVYMARQIGPLIIELIHRTLRRMPADVESFLVEQLQEKLS-----------------PPFLQPEALPKFTSPSEV---QGQDRRHFRPSTARSRLQHAQSIDSDVQKTSPP---RMEKAEIHTPP---VNVAISRSEEL--------ISSPGNH--VISEGVTESQNRPWDVEIDPTATLPPSKAESLSSSASARVALPKLAVILLLGIDGAGKSTLLGTLQGDPDPQVRPSVGFKPVTMMLSDKLKVSW 356
            +E  GSGLAGVR L + RE RRR RT    R +  D+                    +AP  SPRQRRRIEDTH+YLC+KVDP+MG LI  L+  RP +++ A L +LL+++         AR G               + GS+   E  +++       RL +H+DRV+MAR++GPL+ ELI RTLR MPADVE FL+EQL+   S                 PP    E + + +    +    GQ  R  RPSTARSRLQ AQS+D  VQ+TSPP   R E     +PP    N  +   ++L         S PG     + +G  ES N+PWDVE+     +PP + +        +    K+AVILLLG+DGAGK+TLLGTLQG+ DP+VRPSVGFKPVTMMLSD+LKV +
Sbjct:    2 VEMSGSGLAGVRRLHNEREKRRRPRTATTTRPRALDAAGGCSHGNARSTFVEAPPRARAPRVSPRQRRRIEDTHAYLCSKVDPVMGSLILVLMESRPEEIRKAALDHLLSKKRMREASADDARVGRAAGGNPTTADPKQDVCGSEVEEEEAAQR------RRLARHQDRVFMAREVGPLVTELIRRTLRSMPADVELFLIEQLKGVPSGGACDQDMNDNNHRLAFPPPDGAEPISRSSKQHHLGNRSGQPHRPTRPSTARSRLQQAQSLDLHVQQTSPPLSGRTEARRSPSPPRGPQNGGLPDEDDLGSGGVGGESSRPGXXXXAVVDGAKESLNKPWDVEVSSKLNIPPFEDQPREPCKPKQ----KVAVILLLGLDGAGKTTLLGTLQGEQDPRVRPSVGFKPVTMMLSDELKVKF 409          
BLAST of mRNA_C-tenellus_contig6898.1.1 vs. uniprot
Match: A0A6H5KRF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF7_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 9.280e-68
Identity = 180/466 (38.63%), Postives = 237/466 (50.86%), Query Frame = 0
Query:    8 LENGGSGLAGVRHLRDNREWRRRARTE---RSKTTDSI-------------------KAPLGSPRQRRRIEDTHSYLCAKVDPIMGLLITYLISERPNDVQSAMLGYLLARREGLFLGCGSARDGDIMPIVGSDCT------FERGSKKYRHKVGER--LTKHEDRVYMARQIGPLIIELIHRTLRRMPADVESFLVEQLQ----------------EKLS-PPFLQPEALPKFTSPSEV---QGQDRRHFRPSTARSRLQHAQSIDSDVQKTSPPRMEKAEIHTPPVNVAISRS----------------EELISSPGNHVISEGVTESQNRPWDVEI-------------------DPTATLP------------PSKAESLSSS-------ASARVALP-------------KLAVILLLGIDGAGKSTLLGTLQGDPDPQVRPSVGFKPVTMMLSDKLKVSW 356
            +E  GSGLAGVR L + RE RRR RT    R +  D+                    +AP  SPRQRRRIEDTH+YLC+KVDP+MG LI  L+  RP +++ A L +LL ++    +   SA D  +    G + T      +  G +    +  +R  L +H+DRV+MAR++GPL+ ELI RTLR MPADVE FL+EQL+                ++L+ PP    E + + +   ++    GQ     RPSTARSRLQ AQS+D  VQ+TSPP   + E    P +    +S                E      G   + +GV ES N+PWDVE                    DP  T P            P+   S +SS       +S    +P             KLAVILLLG+DGAGK+TLLGTLQG+ +P+VRPSVGFKPVTMMLSD+LKV +
Sbjct:    2 VEMSGSGLAGVRRLHNEREKRRRPRTATTTRPRAVDAAGGCSHDNARSTFVEEPPRARAPRVSPRQRRRIEDTHAYLCSKVDPVMGSLILVLMESRPEEIRKAALDHLLFKKR---MREASADDTGVGRAAGGNATAADPQQYISGIEVEEEEAAQRRRLARHQDRVFMAREVGPLVTELIRRTLRSMPADVELFLIEQLKGVPSGGACDQDMNDNNDRLAFPPPNGAEPISRSSKQHQIGHRSGQPHWPGRPSTARSRLQQAQSLDLQVQQTSPPLSGRTEARRSPSHPRGPQSGGFPDEDDLGADGVGGESSRPGGGGRAVVDGVKESLNKPWDVESLESITHDHWRWLHRRCILPDPAITAPTVQGSNYIQLTVPTTPPSSTSSIVHGLQISSKLNTMPFEDQPRAPSKPKQKLAVILLLGLDGAGKTTLLGTLQGEQNPRVRPSVGFKPVTMMLSDELKVKF 464          
BLAST of mRNA_C-tenellus_contig6898.1.1 vs. uniprot
Match: A0A835Z0A9_9STRA (ADP-ribosylation factor family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.760e-41
Identity = 134/377 (35.54%), Postives = 181/377 (48.01%), Query Frame = 0
Query:   14 GLAGVRHLRDNREWRRRARTERSKTTDSIKAPLGSP---------RQRRRIEDTHSYLCAKVDPIMGLLITYLISERPNDVQSAMLGYLLARREGLFLGCGSARDGDIMPIVGSDCTFERGSKKYRHKVGERLTKHEDRVYMARQIGPLIIELIHRTLRRMPADVESFLVEQLQEKLSPPFLQPEALPKFTSPSEVQGQDRRHFRPSTARSRLQHAQSIDSDVQKTSPPRMEKAEIHTPPV------------------NVAISRSEELISSPGNHVISEGVTESQNRPWDVEIDPTA-TLPPSKAESL--------SSSASARVALPKLAVILLLGIDGAGKSTLLGTLQGDPDPQVRPSVGFKPVTMMLSDKLKV 354
            GLAG+R LR  R         +  + D+ +    S          RQRRR+EDTH YL +KVDP+M   ITYL+  RP DV+ AML Y +ARR        +ARD +   +   +                R  +  DR+YMAR+IGP++  LI+  LRR P DVE+FL+ QLQ+ L  P     ++P   + S          RPSTARSRL  AQ +D+  +     R    +  TP                     +A    E   S  G    S GV ES+   WD+ +   A  LPP+             S +A       KLA +LLLG+DG+GK+TLL TLQGDP P+ +P+VGF P T+ L+  L+V
Sbjct:   11 GLAGIRQLRIAR-----GAAAQENSVDNSRPSTASAAGVECRPFHRQRRRVEDTHKYLTSKVDPVMSDAITYLLFARPQDVRRAMLDYFVARR--------AARDNNNRRLSFRELGL-----------APRAAQKHDRLYMAREIGPVVAHLINAVLRRAPDDVEAFLIGQLQDMLRLPR-DGASVPAPPATS----------RPSTARSRLALAQELDTAAEPLLA-RSASGKKVTPTAXXXXXXXXXXXXXXXXXXTLAPKPPETAPSLGGKRSSSYGVRESKTEHWDLSVSAAAPVLPPTPLTDAQLTACSGGSGTAXXXXXXXKLACLLLLGLDGSGKTTLLRTLQGDPAPRTQPTVGFAPATLALTPALRV 351          
BLAST of mRNA_C-tenellus_contig6898.1.1 vs. uniprot
Match: A0A7S3HGU3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGU3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.960e-10
Identity = 69/241 (28.63%), Postives = 111/241 (46.06%), Query Frame = 0
Query:  124 RGSKKYRHKVGERLTKHEDRVYMARQIGPLIIELIHRTLRRMPADVESFLVEQLQEKLSPPFLQPEALPKFTSPSEVQGQDRRHFRPSTARSRLQHAQSIDSDVQKTSPPRMEKAEIHTPPVN-VAISRSEELISSPGNHVISEGVTESQNRPWDVEIDPTATLPPSKAESLSSSASARVALPKLA---------VILLLGIDGAGKSTLLGTLQGDPDPQVRPSVGFKPVTMMLSDKLKV 354
            R  +K   ++  ++T+ +D  Y   ++ P++   I   L   PAD+   ++E L EK    F QP+          + G+ R+  +       +  A SI   + K               VN +A+ R E++I    N  I + V      P   ++ P          + SSSA+A  ALP +           I +LG+ GAGKS++L  LQG  DP++RP++GF+PV+MMLS+  KV
Sbjct:   15 REKRKPSERLTRKITQTQD--YFLEKVDPIVSGCITHLLCAQPADIPRAIIEYLNEKKENVFYQPKV------GENLDGRPRKELK-------VFLAISIGPIIAKL--------------VNRIALERPEDVIEFMINE-IQKMVDCPVEPPLHKDVAPNVP-------ATSSSAAAPTALPPVVHSHQEERNIQIAVLGLGGAGKSSILNMLQGKHDPKIRPTIGFRPVSMMLSEDTKV 218          
BLAST of mRNA_C-tenellus_contig6898.1.1 vs. uniprot
Match: A0A7S4EEB8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EEB8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.400e-7
Identity = 43/140 (30.71%), Postives = 60/140 (42.86%), Query Frame = 0
Query:   38 TTDSIKAPLGSPRQRRRIEDTHSYLCAKVDPIMGLLITYLISERPNDVQSAMLGYLLARREGLFLGCGSARDGDIMPIVGSDCTFERGSKKYRHKVGERLTKHEDRVYMARQIGPLIIELIHRTLRRMPADVESFLVEQL 177
            T  +IK    S   RRR E    Y+   VDP+M  L+T+L+ E+P+DV   ML YL   R+G              P +  D               +R    EDR YMAR + PL+ +L+   +R  P     F +  L
Sbjct:   50 TAKNIKRRSASAASRRRREIVGEYMRRSVDPVMRELVTHLLVEKPSDVTKEMLAYLRGVRDG------------TTPQIQMD--------------SQRKVSKEDRAYMARDVKPLLTDLLSDVVRARPRAPVDFSIAWL 163          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6898.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FT62_ECTSI1.820e-7542.11ARL13, ARF-like Ras superfamily GTPase n=1 Tax=Ect... [more]
A0A6H5KRF7_9PHAE9.280e-6838.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0A9_9STRA1.760e-4135.54ADP-ribosylation factor family-domain-containing p... [more]
A0A7S3HGU3_9STRA4.960e-1028.63Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4EEB8_9STRA5.400e-730.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 306..356
e-value: 6.1E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..50
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 306..348
e-value: 3.9E-5
score: 23.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 302..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6898contigC-tenellus_contig6898:1302..2899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6898.1.1mRNA_C-tenellus_contig6898.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6898 1302..2899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6898.1.1 ID=prot_C-tenellus_contig6898.1.1|Name=mRNA_C-tenellus_contig6898.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=360bp
MAETLYSLENGGSGLAGVRHLRDNREWRRRARTERSKTTDSIKAPLGSPR
QRRRIEDTHSYLCAKVDPIMGLLITYLISERPNDVQSAMLGYLLARREGL
FLGCGSARDGDIMPIVGSDCTFERGSKKYRHKVGERLTKHEDRVYMARQI
GPLIIELIHRTLRRMPADVESFLVEQLQEKLSPPFLQPEALPKFTSPSEV
QGQDRRHFRPSTARSRLQHAQSIDSDVQKTSPPRMEKAEIHTPPVNVAIS
RSEELISSPGNHVISEGVTESQNRPWDVEIDPTATLPPSKAESLSSSASA
RVALPKLAVILLLGIDGAGKSTLLGTLQGDPDPQVRPSVGFKPVTMMLSD
KLKVSWRSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase