prot_C-tenellus_contig6894.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6894.1.1
Unique Nameprot_C-tenellus_contig6894.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length110
Homology
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BLAST of mRNA_C-tenellus_contig6894.1.1 vs. uniprot
Match: D7FND3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND3_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.000e-14
Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 0 
Query:   12 AREKALLCVTAAVSWSGDRFVEDCGRKEIINIMVGVVFTLSECAGILPSSNMPSTPNAGEDEGGPAGIHLAAGGWSEGGGSGLTAGVEALRIACLECLQ 110
            AREKA LCV  AV  SG RFVE  G K  I++M+ +VFTLS C+    S  +P+  ++G     P  +    GG    GGSGLTAG +ALR++CL+CL+
Sbjct:   36 AREKAFLCVAEAVRASGSRFVEGYGVKPTIHVMIRLVFTLSGCSPA--SGGVPAGSSSGSAV--PGAVRNGTGGV---GGSGLTAGTDALRLSCLKCLE 127
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6894.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FND3_ECTSI2.000e-1447.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6894contigC-tenellus_contig6894:410..1533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6894.1.1mRNA_C-tenellus_contig6894.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6894 410..1533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6894.1.1 ID=prot_C-tenellus_contig6894.1.1|Name=mRNA_C-tenellus_contig6894.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=110bp
MGGGGVGMTRSAREKALLCVTAAVSWSGDRFVEDCGRKEIINIMVGVVFT
LSECAGILPSSNMPSTPNAGEDEGGPAGIHLAAGGWSEGGGSGLTAGVEA
LRIACLECLQ
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