prot_C-tenellus_contig6888.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6888.2.1
Unique Nameprot_C-tenellus_contig6888.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length356
Homology
BLAST of mRNA_C-tenellus_contig6888.2.1 vs. uniprot
Match: D7FJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 3.780e-27
Identity = 101/241 (41.91%), Postives = 122/241 (50.62%), Query Frame = 0
Query:   24 AVVQAHRSSLSAEDASKQGNLAAAARLHLVAARGFFQAAREVQEAKVLASSLLLLADSHAAKSEGATIRLRFSSEGNHPDMVCLGSSTGTVSSSRXXXXXXXXXXXTVGGLMGSERQGRRPH---HRDTAQQDLVDLAMDDSIMNIRRTQSSVTERSGLGGGSGGDKGKGGAANDLRPRVESLLELEHHLSKLGLEPKVQVVRSRHHHPGTAQGHQPRCLSSALGESFCLLNQSVIMGAGG 261
            A  +AHR +  AEDA ++G+ A A  LHL AAR F +AA +VQE  VLASSLLLLADSHAA++E   IRLR S EG        GS   ++SSSR             G     +  GRR +            V   MDDSIM       +  E  G     GG       A   RP+ + LLELE  L+KLGLE K+     R      + G  P  LSSALG+SF  LN+SVI G GG
Sbjct:   11 ASTKAHRCAQGAEDACRKGDHAEATELHLAAARDFLRAAEQVQEHGVLASSLLLLADSHAARAEKGAIRLRLSGEGR-------GSLNNSLSSSRDLTPAEAYRAAAAGVKATGKGDGRRENVVXXXXXXXSHSVGPDMDDSIMRGTVANGNAVEAKG-----GGCDAAAELAQKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQR-LSSGGAPH-LSSALGDSFFFLNKSVIFGGGG 237          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6888.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJW1_ECTSI3.780e-2741.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6888contigC-tenellus_contig6888:3478..6458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6888.2.1mRNA_C-tenellus_contig6888.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6888 3478..6460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6888.2.1 ID=prot_C-tenellus_contig6888.2.1|Name=mRNA_C-tenellus_contig6888.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=356bp
AASIFQDDAVRDIREDEGEGEISAVVQAHRSSLSAEDASKQGNLAAAARL
HLVAARGFFQAAREVQEAKVLASSLLLLADSHAAKSEGATIRLRFSSEGN
HPDMVCLGSSTGTVSSSRSNSHGAGAGAGTVGGLMGSERQGRRPHHRDTA
QQDLVDLAMDDSIMNIRRTQSSVTERSGLGGGSGGDKGKGGAANDLRPRV
ESLLELEHHLSKLGLEPKVQVVRSRHHHPGTAQGHQPRCLSSALGESFCL
LNQSVIMGAGGTTPMSTSTSLVGGGVAGSWVRGVGGGATNDVNDATLQGC
LDTTVVATVANTPSPVVQQTPRPGRLGQAFPPRADPAANTCTLSPSSSNV
DDGVGK
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