prot_C-tenellus_contig6888.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6888.1.2
Unique Nameprot_C-tenellus_contig6888.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length228
Homology
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A6H5L981_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L981_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.720e-26
Identity = 58/85 (68.24%), Postives = 74/85 (87.06%), Query Frame = 0
Query:  145 NVTLPLRETSIYVGGVLSGLALAVGVVFVPYTDVGT-GMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            NV +P +   IY GG+LSGLALAVG++ VPY+D+G+ G++KSLTLFENVL+DID+GYVE V+ +RLL+TAV SMLRTLDPYTE+Q
Sbjct:  256 NVMVPWKGVGIYAGGLLSGLALAVGLLTVPYSDLGSPGLRKSLTLFENVLVDIDQGYVEEVNPERLLETAVGSMLRTLDPYTEYQ 340          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A835Z050_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z050_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.310e-16
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 0
Query:  145 NVTLPLRETSIY----VGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            N+T+P     I     +GG+L G  L + +   PY  V +G+++SL LFENVL+D+DE YV+ VD+ +LLQ A+  MLRTLDPYTEF+
Sbjct:   88 NITVPWESLKIAGLGGLGGLLLGSVLCITLFLTPYGPVSSGIERSLELFENVLVDLDESYVDEVDVQQLLQQAISGMLRTLDPYTEFE 175          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A0G4F0N3_VITBC (PDZ domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0N3_VITBC)

HSP 1 Score: 80.1 bits (196), Expect = 1.130e-13
Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  124 VLASAKVVPGKDGNFQAPWGGNVTLPLRETSIYVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            V+     VP  D     PWGG           +VGG +SG+ L  G++  P   +   +++S+ LFE +L D++ GYVE VD ++L  TAV +MLR+LDPYTEF+
Sbjct:  179 VMNRTLSVPAPDVR-SLPWGG--------IGSFVGGAVSGVILTFGLLLAPVQMIDEPVRRSVALFETILTDVERGYVEKVDTEKLFNTAVTAMLRSLDPYTEFE 274          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A7S4IQW6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQW6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.600e-11
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 0
Query:  112 ALGDKMMEAYSSVLAS--AKVVPGKDGNFQAPWGGNVT-----LPLRETSIYVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            A GDK ++   +   S  + VVPG        W   +T      P   T +    +  G  LA+GV+FVP  +    + + +TLFE +L D+D GYV+ VD ++L +T V +MLR+LDPYTEF+
Sbjct:  147 AAGDKKLQKLMATAKSRLSNVVPGPVAEL---WDKLLTKFLILFPTLRTIVLSFSL--GAVLAIGVIFVPVYNSIDKLTEPVTLFETILNDLDRGYVDDVDTNKLFETGVSAMLRSLDPYTEFE 265          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A7S2EF87_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF87_TRICV)

HSP 1 Score: 70.1 bits (170), Expect = 3.620e-11
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0
Query:  147 TLPLRETSIYVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            TL     S + GGVL+  A+ V V    YT V   M + +TLFE +L D+D GYV+ VD ++L +T V +MLR+LDPYTEF+
Sbjct:   89 TLRTAVLSFFFGGVLATAAILVPV----YTQVDK-MTEPVTLFETILTDLDRGYVDRVDTNKLFETGVSAMLRSLDPYTEFE 165          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: W7T3X2_9STRA (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3X2_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.160e-9
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 0
Query:  156 YVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            ++GG  SGL L +     P T +   + + +TLFEN+L++ID GYVE VD  +L ++AV SML +LDPYTEF+
Sbjct:  266 FLGGGASGLLLLLSPSS-PLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFE 337          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A4D9CU61_9STRA (TSPc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU61_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.720e-9
Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 0
Query:  156 YVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            ++GG  SGL L +     P T +   + + +TLFEN+L++ID GYVE VD  +L ++AV SML +LDPYTEF+
Sbjct:  221 FLGGGASGLLLLLSPSS-PLTSLPPSLLQPVTLFENILLEIDRGYVEEVDDQKLFESAVESMLSSLDPYTEFE 292          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A7S4QMK2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMK2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.730e-9
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
Query:  148 LPLRETSIYVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            L +   S  VG VL+ +A     +F P  D      +S+TLFE +L D+D+ YV+ VD  +L +T V +MLR+LDPYTEF+
Sbjct:  179 LKIAVISATVGAVLTFVA-----IFAPIYDEIDATTESVTLFETILYDLDQRYVDKVDTQKLFETGVSAMLRSLDPYTEFE 254          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A7S1YXK9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YXK9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.080e-8
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
Query:  148 LPLRETSIYVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            L +   S  VG VL+ +A     +F P  D      +S+TLFE +L D+D+ YV+ VD  +L +T V +MLR+LDPYTEF+
Sbjct:  179 LKIAVISATVGAVLTFVA-----IFAPIYDEIDATTESVTLFETILYDLDQRYVDKVDTQKLFETGVSAMLRSLDPYTEFE 254          
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Match: A0A2V3J6V7_9FLOR (Carboxy-terminal-processing protease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V7_9FLOR)

HSP 1 Score: 65.1 bits (157), Expect = 1.400e-8
Identity = 41/119 (34.45%), Postives = 66/119 (55.46%), Query Frame = 0
Query:  112 ALGDKMMEAYSSVLASAKVVPGKDGNFQAPWGGNVTLPLRETSIYVGGVLSGLALAVGVVFVPYTDVGTG--MQKSLTLFENVLMDIDEGYVEAVDMDRLLQTAVVSMLRTLDPYTEFQ 228
            A GD  +EA  +VLA               W  +    L     +V GV +G++L++ V+   ++ +     +++ +TLF+ +L DI+  YVE VD++RL +T V SML TLDPYT+F+
Sbjct:  111 AQGDSDVEAKKNVLAG-----------MISWALSSLKRLFAPGGFVWGVATGISLSLLVLVFQWSTISGDSLLREKVTLFDFILQDINTSYVEKVDINRLFETGVNSMLGTLDPYTQFE 218          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6888.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5L981_9PHAE3.720e-2668.24PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z050_9STRA3.310e-1648.86ClpP/crotonase-like domain-containing protein n=1 ... [more]
A0A0G4F0N3_VITBC1.130e-1340.00PDZ domain-containing protein n=3 Tax=Vitrella bra... [more]
A0A7S4IQW6_9STRA2.600e-1137.10Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2EF87_TRICV3.620e-1147.56Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
W7T3X2_9STRA1.160e-947.95Carboxyl-terminal protease (Fragment) n=1 Tax=Nann... [more]
A0A4D9CU61_9STRA1.720e-947.95TSPc domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S4QMK2_9STRA9.730e-943.21Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1YXK9_9STRA1.080e-843.21Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A2V3J6V7_9FLOR1.400e-834.45Carboxy-terminal-processing protease n=1 Tax=Graci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..106
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..228
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6888contigC-tenellus_contig6888:77..3042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6888.1.2mRNA_C-tenellus_contig6888.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig6888 77..3140 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6888.1.2 ID=prot_C-tenellus_contig6888.1.2|Name=mRNA_C-tenellus_contig6888.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=228bp
MWIASRSVFVFLLGWSQAVAFSTPGLRRRTNSALPQTTIRPPCRRIAPSH
AIGASRDRLVVTKLAGWFDSWGFSSRPVVGGAGKEKVGSEGGQPARKGEK
GGASPGEKLWGALGDKMMEAYSSVLASAKVVPGKDGNFQAPWGGNVTLPL
RETSIYVGGVLSGLALAVGVVFVPYTDVGTGMQKSLTLFENVLMDIDEGY
VEAVDMDRLLQTAVVSMLRTLDPYTEFQ
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