prot_C-tenellus_contig6819.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6819.1.1
Unique Nameprot_C-tenellus_contig6819.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length490
Homology
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BLAST of mRNA_C-tenellus_contig6819.1.1 vs. uniprot
Match: A0A6H5KS32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS32_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.840e-32
Identity = 163/578 (28.20%), Postives = 224/578 (38.75%), Query Frame = 0 
Query:    1 LPEFLEACFGVWNGQQVRS--PFVSPCVASEIVDGIAVMARLPPSLSVCTNSAEAVSGAHKGP--GPVLLEGMLRVLCAVGSRRXXXXXXXXXXXVVDSAMEALEARAVQLLLVAFQGCCCGGRVERVWRDHGSKVLMKIVSLNHFQGGTLERSRGRE----------VWDNFLEGAVEYTRLAIEGKG---DGXXXXGRQPVQDSGEVSTRRAAVLMLELVKLQEEVWTNLQGGVGNCCSHGVGDEPVLWRLGLTNPVVWQHRRKEALTSATDRESRSKGREVGA----LIHSLNGSRWKLRWDCLSCGLGRLSSPSERLLLLLRDQAKASVDGVGLGEGCIGGEVLYEVLMAGVVFCACLRQTTKRRSGHDSDSSDLGPN-DLPTGLGVPLPLPGSTVNRSDTSTGGNGGGASKGACPADFGIGCSSWRGGSF---------------------------ENGGGXXGVDGGALGVATRTMATELV------VSFDGAVPIASGE----------------------------------VGAWFLCCAAEVIDGLSRAVLGEAFVNGLDLGVSANR 489
            L  FL+AC G  +G + R+  PFV     SE+V  +A  A L  S      +AEA   A +       +LEG+L VL   G                D A+ A+    + LLL AF     G   +R+WRD  +  L  +V     +                     +W  FL GAVE  R A+EG G   DG    G  P+  +G     RAA L   L+ L+  +   L+ G          D P+LWRLGLT P VW+ RR EAL +    E+RS G  +      L  +  GSRW  RW+C+S  L RL     RL LL+     A  +G  +G   + GE L+E+  AGV+    +R       G +     L  + DLP+ L V      +      +++GG    A+      DFG+G   +RGGS                            E   G    +    GVA++   + L+      V+F+ A      E                                    AW   C+A V  GL  AV+GEA   GL LG   NR
Sbjct:  603 LTAFLQACLGATDGGRERTAAPFVKAVTVSEVVK-VATAASLSASTFNSAGTAEAADAAIRPTLLSMAVLEGLLGVL-GTGESGGPADSSRGGVGNDDDALAAVRKSGLSLLLGAFSAIGEGRAADRLWRDVAAPTLQDLVLRGPRRAXXXXXXXXXXXXXXPQWCDGIWQEFLGGAVEEARRAMEGDGVHDDGASDQGAPPLLLAGRGGVERAATLTSALLDLRSAL---LRRGATLLPPD---DAPMLWRLGLTRPSVWRQRRLEALAA----EARSTGAPLATTAADLARACVGSRWARRWECVSLVLARLPDAKARLSLLVEGVVSAEAEGGSVG---VAGEALHEIFAAGVMVSRAVRLL----KGEEGRGGVLEVSVDLPSCLLV------APAEDKISASGGMARAAAGVDSVEDFGVGLQRFRGGSMAADGDDPEAVAAVASAEVLDAALAHLGEQSQGAFEAEADGYGVASQQPFSLLLPQGLWRVAFESAATDTKDERLHAVLLSALSSCLALAAQDAXXXXXXXXXXXXVAAAWRTACSATVSSGLVVAVVGEALARGLGLGDEVNR 1155
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6819.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KS32_9PHAE1.840e-3228.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6819contigC-tenellus_contig6819:3565..5808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6819.1.1mRNA_C-tenellus_contig6819.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6819 3565..5808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6819.1.1 ID=prot_C-tenellus_contig6819.1.1|Name=mRNA_C-tenellus_contig6819.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=490bp
LPEFLEACFGVWNGQQVRSPFVSPCVASEIVDGIAVMARLPPSLSVCTNS
AEAVSGAHKGPGPVLLEGMLRVLCAVGSRRGSRRGSGKGSGVVDSAMEAL
EARAVQLLLVAFQGCCCGGRVERVWRDHGSKVLMKIVSLNHFQGGTLERS
RGREVWDNFLEGAVEYTRLAIEGKGDGGGGGGRQPVQDSGEVSTRRAAVL
MLELVKLQEEVWTNLQGGVGNCCSHGVGDEPVLWRLGLTNPVVWQHRRKE
ALTSATDRESRSKGREVGALIHSLNGSRWKLRWDCLSCGLGRLSSPSERL
LLLLRDQAKASVDGVGLGEGCIGGEVLYEVLMAGVVFCACLRQTTKRRSG
HDSDSSDLGPNDLPTGLGVPLPLPGSTVNRSDTSTGGNGGGASKGACPAD
FGIGCSSWRGGSFENGGGGGGVDGGALGVATRTMATELVVSFDGAVPIAS
GEVGAWFLCCAAEVIDGLSRAVLGEAFVNGLDLGVSANR*
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