prot_C-tenellus_contig6764.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6764.2.1
Unique Nameprot_C-tenellus_contig6764.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length257
Homology
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BLAST of mRNA_C-tenellus_contig6764.2.1 vs. uniprot
Match: D8LQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ19_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 8.930e-28
Identity = 93/294 (31.63%), Postives = 128/294 (43.54%), Query Frame = 0 
Query:   28 MRDFERNASIKTRDALLENGDLL-CRAE-SIVASVKERDALDSKPSS------LRSRFIPGDPFAREEADVDTWARHFTYLSVVPATSFQRRLGDDEGAVQRAEARPNLEGGLGVCDL-------ITKETNFPDVEAGDPVVIG----REMRPDRRQS----MPYPENPRTEEIIESHGILEEYIAYDYTPPAIQ-------------------------------------------RWTEK-----------STDGSRHGQCSGLTTPQQELKEQIMDHLFDELWKKLVPDL 244
            MR+FER+++  TR+ALL+N  LL C    S  A   + D   + P S      +  R++PGDPFA EEADV  WA+HFTYLSVVP    +R  G D      AE R N   G G+ +          ++    D E G    +     +++ P+   +        E P+ EE+  SHG+ EEY+AYD  PP                                               W              ST G  H   + L TPQ+EL+++IMD LFDELW+++ PDL
Sbjct:   57 MREFERSSAENTREALLDNDALLLCEPPASANAGSADNDGRQTSPLSPXXXXXVPLRYVPGDPFANEEADVGAWAKHFTYLSVVPT---ERGEGGD------AEKRSNDNAGGGLLERGPVAEPPPVRDVMETDEETGGVAAVEGSRIQDLTPEEAAAELAGRRLEEMPQGEEVFASHGVYEEYLAYDCRPPGFDDVTSPGGETMGPGEEDPRLAAKGSGAWAVTGVVPNANSAVGQGAWVSNNAASEPPALGASTTGGSHRVVARLDTPQRELRQEIMDRLFDELWERITPDL 341
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6764.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ19_ECTSI8.930e-2831.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6764contigC-tenellus_contig6764:3010..3780 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6764.2.1mRNA_C-tenellus_contig6764.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6764 2639..3840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6764.2.1 ID=prot_C-tenellus_contig6764.2.1|Name=mRNA_C-tenellus_contig6764.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=257bp
MQDEDGGAGGKGDGWDSSSNDGEWGGGMRDFERNASIKTRDALLENGDLL
CRAESIVASVKERDALDSKPSSLRSRFIPGDPFAREEADVDTWARHFTYL
SVVPATSFQRRLGDDEGAVQRAEARPNLEGGLGVCDLITKETNFPDVEAG
DPVVIGREMRPDRRQSMPYPENPRTEEIIESHGILEEYIAYDYTPPAIQR
WTEKSTDGSRHGQCSGLTTPQQELKEQIMDHLFDELWKKLVPDLSRAMIC
GREKDV*
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