prot_C-tenellus_contig6759.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6759.4.1
Unique Nameprot_C-tenellus_contig6759.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length79
Homology
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BLAST of mRNA_C-tenellus_contig6759.4.1 vs. uniprot
Match: A0A836CI77_9STRA (DENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI77_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.100e-14
Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = 0 
Query:    2 DPRQVYLVTPPFVVRPGNTSTEHDAVALVCS---SMPPEM--GTMVIRAEQMGKHDHWVRALAARLTPKEHQDRMVAIYG 76
            +P  V LVTPPF V  G+ +TEHD VALV +   + P E   GT+VIRAE M  H   VRAL A+LTP+EH   M ++YG
Sbjct: 4048 EPASVSLVTPPFAVHSGHATTEHDCVALVWNQEAAAPGESVPGTLVIRAEDMTTHRMLVRALKAKLTPREHLTMMRSLYG 4127
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BLAST of mRNA_C-tenellus_contig6759.4.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.010e-11
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:   19 NTSTEHDAVALVCSSMPPEMGTMVIRAEQMGKHDHWVRALAARLTPKEHQDRMVAIYGG 77
            + + E DAVALV    P E GT+VIRAE +     WVRALAARLT +EH  RM  +YGG
Sbjct: 4787 DVTNERDAVALVVFRNPTETGTLVIRAESVEAQHVWVRALAARLTSREHHARMAELYGG 4845
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6759.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CI77_9STRA2.100e-1452.50DENN domain-containing protein n=1 Tax=Tribonema m... [more]
D7FYV2_ECTSI2.010e-1155.93PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6759contigC-tenellus_contig6759:3554..4700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6759.4.1mRNA_C-tenellus_contig6759.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6759 3069..4782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6759.4.1 ID=prot_C-tenellus_contig6759.4.1|Name=mRNA_C-tenellus_contig6759.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=79bp
MDPRQVYLVTPPFVVRPGNTSTEHDAVALVCSSMPPEMGTMVIRAEQMGK
HDHWVRALAARLTPKEHQDRMVAIYGGD*
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