prot_C-tenellus_contig6741.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6741.2.1
Unique Nameprot_C-tenellus_contig6741.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length91
Homology
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A836C915_9STRA (Translation initiation factor IF-3, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C915_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.360e-29
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPK 86
            E+KEVKMSYKIE HDY VR++NA+KFI+QG RV+V++QFRGREQ HMDLG  L+++I  D + T   +G P+REGNRL LIL PK
Sbjct:  181 EMKEVKMSYKIEDHDYQVRLRNAKKFIAQGDRVKVVVQFRGREQQHMDLGHELLTKIVADCEGTVATDGRPKREGNRLSLILAPK 265          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A6H5JNV3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNV3_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 3.250e-28
Identity = 55/85 (64.71%), Postives = 69/85 (81.18%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPK 86
            E+KEVKMSYKIE HDY VR++NAQKF+ QGHRVR+++ FRGREQSHMDLG  L+ ++T DL+  A  E   RREGNRL +I++PK
Sbjct:  202 EMKEVKMSYKIETHDYMVRLRNAQKFVKQGHRVRIVVTFRGREQSHMDLGNVLLDKVTNDLEGLALVEPK-RREGNRLSMIVFPK 285          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A6V1LHA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LHA9_HETAK)

HSP 1 Score: 98.2 bits (243), Expect = 3.720e-23
Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPK 86
            ELKEVKMSYKIE+HDY VR K A KF+  GHRV++++QFRGREQ HMDLG++L+ +++ D++  A  E   RREGNRL ++L P+
Sbjct:  142 ELKEVKMSYKIEKHDYEVRAKAATKFLKGGHRVKLLVQFRGREQQHMDLGRDLLGRLSGDVEDLALPEPI-RREGNRLTMLLTPR 225          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: W7TKZ8_9STRA (Translation initiation factor if-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKZ8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.760e-22
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPKQ 87
            E+KEVKMSYKIE HDY VR+K   +F+ +G +V+V++QFRGREQ H+DLG  L+ ++  DLK  A  EG  RREG RL+ +  PK+
Sbjct:  248 EVKEVKMSYKIENHDYGVRMKQMTRFLDEGDKVKVMIQFRGREQQHIDLGHELLGKVGGDLKELAVQEGVVRREGGRLIALFKPKK 333          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A2T1DR64_9CYAN (Translation initiation factor IF-3 n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1DR64_9CYAN)

HSP 1 Score: 92.0 bits (227), Expect = 1.520e-21
Identity = 41/85 (48.24%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    3 LKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPKQ 87
            +KEVKM YKIE+HDY+VR+  A+KFI  G +V+  + FRGRE+ H DL ++L+ ++  DL+ TA+ +  P+REG+R++++L PK+
Sbjct:   89 VKEVKMRYKIEEHDYNVRVNRAEKFIKDGDKVKATITFRGRERQHEDLAEDLLKRMAADLQETADIQQAPKREGHRMMMLLAPKK 173          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A7C6IVA8_9FIRM (Translation initiation factor IF-3 n=1 Tax=Thermoanaerobacterales bacterium TaxID=2304039 RepID=A0A7C6IVA8_9FIRM)

HSP 1 Score: 92.0 bits (227), Expect = 1.550e-21
Identity = 43/85 (50.59%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    3 LKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPKQ 87
            +KE++MS KIE+HD+ VR+KNA KFIS+G +V+V ++FRGRE +H  LG  +++++ E+LK  AN E  P+ EG  +V++L PKQ
Sbjct:   89 IKEIRMSPKIEEHDFQVRVKNAHKFISEGDKVKVTVRFRGREITHTALGYEVLNKMAEELKEIANVEKMPKVEGKNMVMVLAPKQ 173          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A7S2H9R6_9STRA (Translation initiation factor IF-3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H9R6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.580e-21
Identity = 46/84 (54.76%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYP 85
            E+KEVKMSYKI+ HDY VR K A KF+  G RV+ ++QFRGREQ H++LG+ L+ +++ED K  A ++  PRREGNR+V+ + P
Sbjct:  144 EMKEVKMSYKIDTHDYMVRQKAAIKFLKSGSRVKAVVQFRGREQQHINLGQELLKKLSEDCKEFATSD-RPRREGNRVVMFINP 226          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A7V6XL51_9FIRM (Translation initiation factor IF-3 n=1 Tax=Thermoanaerobacterales bacterium TaxID=2304039 RepID=A0A7V6XL51_9FIRM)

HSP 1 Score: 91.3 bits (225), Expect = 3.110e-21
Identity = 43/84 (51.19%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    3 LKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPK 86
            +KE++MS KIE+HD  VR+KNA KFIS+G +V+V ++FRGRE +H  LG+ +++++ ED+K  A+ E  PR EG  +V+IL PK
Sbjct:   89 VKEIRMSPKIEEHDLQVRVKNASKFISEGDKVKVTVRFRGREIAHTTLGREILTKMAEDMKDIASVEKKPRVEGRNMVMILAPK 172          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A1L9QT99_9CYAN (Translation initiation factor IF-3 n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1L9QT99_9CYAN)

HSP 1 Score: 91.3 bits (225), Expect = 4.320e-21
Identity = 39/88 (44.32%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPKQPA 89
            ++KEVKM YKIE+HDY+VR+KNA+KF+ +G +V+  + F+GRE  H DL + L+ ++ +DL+  A  +  P+REG  ++++L PK+ +
Sbjct:  101 DVKEVKMRYKIEEHDYNVRLKNARKFLQKGDKVKATINFKGREAQHSDLAEGLLKRLAKDLEEEAEIQQEPKREGRNMMMLLSPKKQS 188          
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Match: A0A2T2RG24_9CYAN (Translation initiation factor IF-3 n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2RG24_9CYAN)

HSP 1 Score: 90.9 bits (224), Expect = 4.610e-21
Identity = 39/86 (45.35%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    2 ELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDLGKNLMSQITEDLKATANAEGNPRREGNRLVLILYPKQ 87
            E+KEVKM YKI++HDY VR+  A++F+  G +V+  + FRGRE  H+DL + L+ ++ EDLK TA  + +P+REG  ++++L P++
Sbjct:   90 EVKEVKMRYKIDEHDYGVRVNQAKRFLKGGDKVKATINFRGREIQHLDLARELLERMAEDLKDTAEIQQSPKREGRNMIMLLSPRK 175          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6741.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C915_9STRA1.360e-2964.71Translation initiation factor IF-3, C-terminal dom... [more]
A0A6H5JNV3_9PHAE3.250e-2864.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1LHA9_HETAK3.720e-2358.82Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TKZ8_9STRA3.760e-2254.65Translation initiation factor if-3 n=2 Tax=Monodop... [more]
A0A2T1DR64_9CYAN1.520e-2148.24Translation initiation factor IF-3 n=1 Tax=filamen... [more]
A0A7C6IVA8_9FIRM1.550e-2150.59Translation initiation factor IF-3 n=1 Tax=Thermoa... [more]
A0A7S2H9R6_9STRA1.580e-2154.76Translation initiation factor IF-3 n=1 Tax=Dictyoc... [more]
A0A7V6XL51_9FIRM3.110e-2151.19Translation initiation factor IF-3 n=1 Tax=Thermoa... [more]
A0A1L9QT99_9CYAN4.320e-2144.32Translation initiation factor IF-3 n=2 Tax=Cyanoba... [more]
A0A2T2RG24_9CYAN4.610e-2145.35Translation initiation factor IF-3 n=5 Tax=Cyanoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyGENE3D3.30.110.10coord: 1..90
e-value: 4.6E-30
score: 105.4
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilySUPERFAMILY55200Translation initiation factor IF3, C-terminal domaincoord: 2..87
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 2..87
e-value: 4.1E-23
score: 79.8
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 1..88
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 1..86
e-value: 4.6E-30
score: 103.4
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 1..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6741contigC-tenellus_contig6741:4722..6882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6741.2.1mRNA_C-tenellus_contig6741.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6741 3237..6933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6741.2.1 ID=prot_C-tenellus_contig6741.2.1|Name=mRNA_C-tenellus_contig6741.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=91bp
MELKEVKMSYKIEQHDYSVRIKNAQKFISQGHRVRVILQFRGREQSHMDL
GKNLMSQITEDLKATANAEGNPRREGNRLVLILYPKQPAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036788T_IF-3_C_sf
IPR001288Translation_initiation_fac_3
IPR019815Translation_initiation_fac_3_C