prot_C-tenellus_contig6723.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6723.1.1
Unique Nameprot_C-tenellus_contig6723.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length89
Homology
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: D7FL11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL11_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.270e-35
Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    5 VRSWFPTMTMAMITAPTRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVT 88
            +RSWFP M MAMI+ P+R RP +A+F++ PKMTKWEVKE+L KIYNVPVK V TQNF+GKRKRI GKR ++ YKRP++KKAIVT
Sbjct:    3 IRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVT 86          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A835YVT8_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT8_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.030e-33
Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = 0
Query:    5 VRSWFPTMTMAMITAPTRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVTL 89
            V+ WFP+  M ++T PTRGRP +AAFRV PKMTK EVKE+L K+Y VPVK V TQNF GKRKRI G R +ISYKRPD+KKAIVTL
Sbjct:    3 VKEWFPSFFMQLVTMPTRGRPQQAAFRVSPKMTKLEVKEYLLKVYGVPVKKVMTQNFLGKRKRIQGSRSIISYKRPDFKKAIVTL 87          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A6U3SB59_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB59_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.870e-21
Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    5 VRSWFPTMTMAMITA--PTRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVT 88
            +R W P M + +++A   T      A FRV PKMTK EVKEHL KIYN+PV  V TQN+ GKRKR+ GKRR+  YK  D+KKAIVT
Sbjct:   11 LRVWMPNMPIVLLSARNATETSAATATFRVLPKMTKHEVKEHLTKIYNLPVAKVNTQNYLGKRKRVVGKRRIAYYKNADFKKAIVT 96          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: B8C4N9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4N9_THAPS)

HSP 1 Score: 87.0 bits (214), Expect = 5.190e-20
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    3 QSVRSWFPTMTMAMITAP--TRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIV 87
            Q  + W P++ + ++TA   T   P  A FR+ PKMTK EV+E+L KIY++PVK V TQN+ GKR RI GKR ++  KRPDYKKA V
Sbjct:   24 QGYKMWMPSLPLVLLTATHATPSNPATAQFRILPKMTKHEVREYLTKIYDLPVKEVRTQNYLGKRMRIIGKRHIVYAKRPDYKKAFV 110          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A4D9DHX4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHX4_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.190e-19
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0
Query:   14 MAMITAPTRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVTL 89
            MA+I APT+  P +A FRV P M K E++E+L KIY + V+ V T N  G+RKRI G RR++ YKRPD+KKA VTL
Sbjct:    1 MALIRAPTQATPYQAVFRVSPSMNKPEIREYLTKIYGLNVRKVMTANMAGRRKRIMGSRRILRYKRPDFKKAYVTL 76          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A7S0ABN5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ABN5_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 7.660e-19
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    6 RSWFPTMTMAMITA--PTRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVT 88
            R W PTM + ++ A   T     +A FRV P+MTK E+KEHL KIY++PVK V T N+ GKRKR+ G+R+V  YK  D+KKAIVT
Sbjct:   11 RQWMPTMPIVLVDAVNATERANAQATFRVLPRMTKHEIKEHLQKIYDLPVKKVHTMNYLGKRKRVYGERKVAYYKYRDFKKAIVT 95          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A7S2RP09_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RP09_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 4.270e-18
Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    6 RSWFPTMTMAMITA--PTRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVT 88
            R W PTM + +++A   T   P  A FRV PKMTK E+KE+L KIYN+PV  V T N+ GKRKR  GKR+ + YK  D+KKA VT
Sbjct:   11 RMWMPTMPITLVSARNATETAPAMATFRVLPKMTKHEIKEYLTKIYNLPVTQVDTINYMGKRKRAIGKRKSVYYKYRDFKKAHVT 95          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A1E7FSR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSR6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 4.990e-18
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    2 AQSVRSWFPTMTMAMITAP--TRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVT 88
            A+  R W P M M M++A   T  +P +A FRV P+MTK E+KE+L KIY +PV+ V T N+ GKRK + G   VI YK  D+KKA+V+
Sbjct:    9 AKQFRMWMPNMPMLMVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVRQVNTSNYMGKRKIVRGSSAVIRYKYADFKKAVVS 97          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A1Z5JAC6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAC6_FISSO)

HSP 1 Score: 80.1 bits (196), Expect = 1.860e-17
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    3 QSVRSWFPTMTMAMITAP--TRGRPTKAAFRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVT 88
            Q  R W PTM + +++A   T   P +A FR  P+MTK E+KE+L KIY +PVK V T N+ GKRKR+  + + + +K  D+KKA+VT
Sbjct:    8 QQFRMWMPTMPLTLVSAKNATPTHPARAVFRTLPRMTKHEIKEYLTKIYQLPVKQVNTMNYQGKRKRLLTQNKPVYFKYKDFKKAVVT 95          
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Match: A0A7S2W937_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W937_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.520e-14
Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    2 AQSVRSWFPTMTMAMITAPTRGRPTKAA---FRVPPKMTKWEVKEHLWKIYNVPVKNVTTQNFDGKRKRIAGKRRVISYK-RPDYKKAIVT 88
            A  V+ +FP M M +++    G  TKA    FRVPP MTK E+KE+L KIY++PV  V T NFDG+ KR  GK R + YK +  +K+A VT
Sbjct:   28 AMGVKEFFPNMFMTLLSVRNAGSKTKAPLAIFRVPPAMTKLEIKEYLTKIYSLPVARVNTVNFDGRWKRHYGKTRSVPYKSQKKHKRAYVT 118          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6723.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FL11_ECTSI1.270e-3570.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVT8_9STRA7.030e-3370.59Ribosomal protein L23/L15e core domain-containing ... [more]
A0A6U3SB59_9STRA3.870e-2156.98Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B8C4N9_THAPS5.190e-2052.87Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A4D9DHX4_9STRA6.190e-1956.58Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0ABN5_9STRA7.660e-1954.12Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2RP09_9STRA4.270e-1854.12Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7FSR6_9STRA4.990e-1849.44Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A1Z5JAC6_FISSO1.860e-1746.59Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S2W937_9STRA1.520e-1448.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..89
e-value: 1.8E-25
score: 91.8
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 26..89
e-value: 2.7E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR12059RIBOSOMAL PROTEIN L23-RELATEDcoord: 5..89
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 16..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6723contigC-tenellus_contig6723:2390..3357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6723.1.1mRNA_C-tenellus_contig6723.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6723 2390..3357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6723.1.1 ID=prot_C-tenellus_contig6723.1.1|Name=mRNA_C-tenellus_contig6723.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=89bp
MAQSVRSWFPTMTMAMITAPTRGRPTKAAFRVPPKMTKWEVKEHLWKIYN
VPVKNVTTQNFDGKRKRIAGKRRVISYKRPDYKKAIVTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23
IPR012678Ribosomal_L23/L15e_core_dom_sf