prot_C-tenellus_contig6722.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6722.1.1
Unique Nameprot_C-tenellus_contig6722.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length85
Homology
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: A0A182H1F4_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H1F4_AEDAL)

HSP 1 Score: 76.6 bits (187), Expect = 1.870e-14
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    7 PRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVFD 80
            P+  R A +SP  + W +A AEE+  +  NN W  A LPPGR+A+G KW+ K K +  GE+VR+KARLVA+ F 
Sbjct:   55 PQNYREAMASPHAESWKKAMAEELESIHANNTWTLADLPPGRKAVGCKWVFKMKRDINGEIVRFKARLVAQGFS 128          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: Q8WRX5_ANOGA (Pol polyprotein (Fragment) n=2 Tax=Anopheles gambiae TaxID=7165 RepID=Q8WRX5_ANOGA)

HSP 1 Score: 73.6 bits (179), Expect = 2.320e-13
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    7 PRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVFDNL 82
            PR    A S P+ DLW RA  EE+  L  N  W  A LP  R+A+G+KW+ KRK +  G++V+YKARLVAK F  +
Sbjct:  429 PRTFEEAMSCPDRDLWKRAMEEEIKSLHENATWEIASLPKDRKAVGSKWVFKRKMDGDGKIVQYKARLVAKGFSQV 504          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: A0A2K3KML6_TRIPR (Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KML6_TRIPR)

HSP 1 Score: 69.3 bits (168), Expect = 7.320e-13
Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 0
Query:    1 MNSLQNPRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAK 77
            ++SL  P   + A   P   LW +A AEE+  L   N W    LPPG+RAIG++W++K KT   G V RYKARLVAK
Sbjct:   93 IHSLSEPSSYKEASLDP---LWQKAMAEELVALHKTNTWDLVPLPPGKRAIGSRWVYKIKTKSDGSVERYKARLVAK 166          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 72.0 bits (175), Expect = 7.820e-13
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
Query:   17 PECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVF 79
            PE +LW  A  +EM+ L  N  W    LPPGR+A+G KWI KRK ++ G VVRYKARLVA+ F
Sbjct:    4 PEAELWKAAMDDEMTSLRENGTWQLTDLPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGF 66          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: UPI00044168C4 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044168C4)

HSP 1 Score: 66.2 bits (160), Expect = 1.300e-12
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0
Query:    7 PRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLV 75
            PR  R A   P+ DLW +   EE+   + N  W    LPPGR+AIG++W+ K K    G V RYKARLV
Sbjct:    1 PRSFREAMKRPDSDLWYKVAMEEIEAHIANGTWELVQLPPGRKAIGSRWVFKIKRKADGSVERYKARLV 69          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: A0A1W7R6D9_AEDAL (Putative polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6D9_AEDAL)

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-12
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    7 PRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVF 79
            P+    A +SPE D W  A AEEM+ L+  + W    LP  R+AIG++W++KRK +  G+VVR+KARLVA+ F
Sbjct:  644 PKSYAEALASPESDKWKAAMAEEMASLMEKDTWDVVQLPADRKAIGSRWVYKRKESANGDVVRFKARLVAQGF 716          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: UPI00195390E8 (uncharacterized protein LOC120416629 n=1 Tax=Culex pipiens pallens TaxID=42434 RepID=UPI00195390E8)

HSP 1 Score: 71.2 bits (173), Expect = 1.560e-12
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    4 LQNPRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVFD 80
            L  PR    A +SP+ + W +A  +E+  +  N  W    LPPGR+A+G+KW++K K +  G V+R+KARLVA+ F 
Sbjct: 3937 LAEPRTYAEAMASPDAERWKQAMVDELESIKANETWTLVDLPPGRKAVGSKWVYKIKRDADGRVLRFKARLVAQGFS 4013          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: A0A0J7KHD5_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KHD5_LASNI)

HSP 1 Score: 70.9 bits (172), Expect = 2.060e-12
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    4 LQNPRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAK 77
            L  P+    A   P+   W +A  EE++ L+ N  W EA LPPGR+AI  KW+ K K    GE+VRYKARLVA+
Sbjct:  485 LDEPKTYGEAILRPDGATWQKAVDEELASLMKNGTWCEADLPPGRQAISAKWVFKLKRGPSGEIVRYKARLVAR 558          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: UPI000904DB28 (uncharacterized protein LOC109220059 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI000904DB28)

HSP 1 Score: 66.6 bits (161), Expect = 2.320e-12
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    1 MNSLQNPRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVF 79
            +N  ++P+  + A SS +   W+ A  +EM  ++ NN WV   LP G +AIG KW+ +RK N  G V  +KARLVAK F
Sbjct:   11 LNVEEDPKTFQEAMSSGDAAFWNEAVDDEMDSIISNNTWVLVDLPLGSKAIGCKWVFRRKYNTDGFVQTFKARLVAKGF 89          
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Match: A0A182GDL1_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDL1_AEDAL)

HSP 1 Score: 69.7 bits (169), Expect = 2.850e-12
Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 0
Query:    5 QNPRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRAIGTKWIHKRKTNKFGEVVRYKARLVAKVFD 80
            + P     A  S E DLW  A  EE   L+ N  WV A LP GR+AIG+KW+ K+K +  G V ++KARLVA+ F 
Sbjct:    7 EEPSSYEEAVRSSESDLWKAAMQEEYDSLMENGTWVLAELPAGRKAIGSKWVFKKKEDSAGNVCKFKARLVAQGFS 82          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6722.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182H1F4_AEDAL1.870e-1448.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q8WRX5_ANOGA2.320e-1348.68Pol polyprotein (Fragment) n=2 Tax=Anopheles gambi... [more]
A0A2K3KML6_TRIPR7.320e-1348.05Gag-pol polyprotein (Fragment) n=1 Tax=Trifolium p... [more]
A0A182GIT5_AEDAL7.820e-1355.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI00044168C41.300e-1246.38hypothetical protein n=1 Tax=Punctularia strigosoz... [more]
A0A1W7R6D9_AEDAL1.500e-1247.95Putative polyprotein (Fragment) n=1 Tax=Aedes albo... [more]
UPI00195390E81.560e-1241.56uncharacterized protein LOC120416629 n=1 Tax=Culex... [more]
A0A0J7KHD5_LASNI2.060e-1247.30Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
UPI000904DB282.320e-1243.04uncharacterized protein LOC109220059 n=1 Tax=Nicot... [more]
A0A182GDL1_AEDAL2.850e-1246.05Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 36..80
e-value: 2.2E-9
score: 37.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6722contigC-tenellus_contig6722:4436..4690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6722.1.1mRNA_C-tenellus_contig6722.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6722 4320..6418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6722.1.1 ID=prot_C-tenellus_contig6722.1.1|Name=mRNA_C-tenellus_contig6722.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=85bp
MNSLQNPRLLRAAHSSPECDLWDRARAEEMSGLLLNNVWVEAVLPPGRRA
IGTKWIHKRKTNKFGEVVRYKARLVAKVFDNLRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2