prot_C-tenellus_contig6568.4.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6568.4.1
Unique Nameprot_C-tenellus_contig6568.4.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length138
Homology
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BLAST of mRNA_C-tenellus_contig6568.4.1 vs. uniprot
Match: A0A6H5JPL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPL9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.240e-12
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:   94 EHLVKKVVQLNHLAVYWNPAEAGNPCSIHVSDLPVEEAEVVICR 137
            + LVKK +QLN LAVYWNPAE+GNPCS+ +SD+PV++AEVVI R
Sbjct:  262 DRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISR 305
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BLAST of mRNA_C-tenellus_contig6568.4.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.350e-12
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:   94 EHLVKKVVQLNHLAVYWNPAEAGNPCSIHVSDLPVEEAEVVICR 137
            + LVKK +QLN LAVYWNPAE+GNPCS+ +SD+PV++AEVVI R
Sbjct:  301 DRLVKKTLQLNQLAVYWNPAESGNPCSMDLSDIPVDQAEVVISR 344
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6568.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPL9_9PHAE2.240e-1270.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP20_ECTSI2.350e-1270.45Vacuolar protein sorting-associated protein, putat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6568contigC-tenellus_contig6568:6694..7107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6568.4.1mRNA_C-tenellus_contig6568.4.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6568 6694..7107 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6568.4.1 ID=prot_C-tenellus_contig6568.4.1|Name=mRNA_C-tenellus_contig6568.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=138bp
MTSSHTPKDHISHTSSPFYVGVTLESLHLQSTYRGPEPGTGDSAASSLGL
AAPPPADVTDSDEEVSSEGARDGQTGWGIGRVASGSLGRGGRNEHLVKKV
VQLNHLAVYWNPAEAGNPCSIHVSDLPVEEAEVVICR*
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