prot_C-tenellus_contig6566.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6566.1.1
Unique Nameprot_C-tenellus_contig6566.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length140
Homology
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: D7FLA9_ECTSI (Gamma tubulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA9_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.000e-79
Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIGSEFWKQLC EHGIS DGTLQE+AS GDDRKDVFFYQADDD Y+PRALLLDLEPRVIN IQSEGYR LFNPEN+FVSKEGGGAGNNWA+G+RQAEEQHDYLMDMIDREADGSDSLE
Sbjct:   99 MPREIITLQVGQCGNQIGSEFWKQLCAEHGISPDGTLQEFASHGDDRKDVFFYQADDDHYIPRALLLDLEPRVINMIQSEGYRDLFNPENVFVSKEGGGAGNNWASGYRQAEEQHDYLMDMIDREADGSDSLE 231          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A397DIA9_9STRA (Tubulin gamma chain n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DIA9_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.030e-72
Identity = 103/133 (77.44%), Postives = 120/133 (90.23%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIGSEFWKQLC EHGIS DG +Q+YA+QG+DRKDVFFYQADD+ Y+PRALL+DLEPRVIN I +  YR+L+NPEN F++K+GGGAGNNWA+G+ Q E+ HD LM+MIDREADGSDSLE
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISPDGIVQDYATQGNDRKDVFFYQADDEHYIPRALLMDLEPRVINSIMNSSYRNLYNPENTFIAKDGGGAGNNWASGYNQGEQHHDLLMEMIDREADGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A835Z905_9STRA (Tubulin gamma chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z905_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.500e-71
Identity = 117/155 (75.48%), Postives = 128/155 (82.58%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRK----------------DVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQA------EEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIGSEFWKQLC EHGIS DG LQ+YASQGDDRK                DVFFYQADD+ Y+PRALLLDLEPRVINKI+S+G+R L+NPENI+VSKEGGGAGNNWA+G+RQA      EEQHDYLM+MIDREADGSDSLE
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCAEHGISADGILQDYASQGDDRKASSCHAFCPCMCHAQQDVFFYQADDEHYIPRALLLDLEPRVINKIRSDGFRDLYNPENIYVSKEGGGAGNNWASGYRQAANFIQSEEQHDYLMEMIDREADGSDSLE 155          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A024TYX1_9STRA (Tubulin gamma chain n=13 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TYX1_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.410e-69
Identity = 103/133 (77.44%), Postives = 120/133 (90.23%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIGSEFWKQLC EHGIS DG +Q+YA+QG+DRKDVFFYQADD+ Y+PRALL+DLEPRVIN I +  YR+L+NPEN F++K+GGGAGNNWA+G+ Q E+ HD LM+MIDREADGSDSLE
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKQLCVEHGISPDGIVQDYATQGNDRKDVFFYQADDEHYIPRALLMDLEPRVINSIMNSSYRNLYNPENTFIAKDGGGAGNNWASGYNQGEQHHDLLMEMIDREADGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: H3HD81_PHYRM (Tubulin gamma chain n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD81_PHYRM)

HSP 1 Score: 215 bits (548), Expect = 1.290e-68
Identity = 100/133 (75.19%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQ GQCGNQIG EFWKQLC EHGIS DG +Q++A+ G DRKDVFFYQADD+ Y+PRALL+DLEPRVIN I +  +++L+NPEN FVSKEGGGAGNNWA+G+ Q E  HD LM+MIDREADGSDSLE
Sbjct:    1 MPREIITLQAGQCGNQIGMEFWKQLCAEHGISPDGIVQDFATSGHDRKDVFFYQADDEHYIPRALLMDLEPRVINSISTSTFKNLYNPENFFVSKEGGGAGNNWASGYHQGESHHDQLMEMIDREADGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A7S1SG93_9CHLO (Tubulin gamma chain (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SG93_9CHLO)

HSP 1 Score: 212 bits (539), Expect = 7.030e-68
Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIGSEFWK+LC+EHGIS DG L+++A+QG DRKDVFFYQADDD Y+PRALLLDLEPRVIN IQ+   R+LFN ENIF+++ GGGAGNNWA+G  QAE   + L+DMIDREA+GSDSLE
Sbjct:    1 MPREIITLQVGQCGNQIGSEFWKKLCQEHGISKDGMLEDFATQGGDRKDVFFYQADDDHYIPRALLLDLEPRVINTIQNSDIRNLFNHENIFIAEHGGGAGNNWASGFTQAESVQEDLLDMIDREAEGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: F0WMZ0_9STRA (Tubulin gamma chain n=2 Tax=Albugo TaxID=65356 RepID=F0WMZ0_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.050e-67
Identity = 103/133 (77.44%), Postives = 118/133 (88.72%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIG EFWKQLC EHGIS DG + +YA+QG DRKDVFFYQADD+ Y+PRALL+DLEPRVIN I +  Y++L+NPEN F+SKEGGGAGNNWA+G+ Q E+QHD LM+MIDREADGSDSLE
Sbjct:    1 MPREIITLQVGQCGNQIGMEFWKQLCVEHGISPDGIVHDYATQGHDRKDVFFYQADDEHYIPRALLMDLEPRVINSILNSTYKNLYNPENFFMSKEGGGAGNNWASGYHQGEQQHDLLMEMIDREADGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A5D6XYE4_9STRA (Tubulin gamma chain n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYE4_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.520e-67
Identity = 103/133 (77.44%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQ+G+EFWKQLC EHGIS DG + ++AS G DRKDVFFYQADD+ YVPRALLLDLEPRVIN I + GYR+L+NPEN F SK+GGGAGNNWA+G+ Q ++ HD LMDMIDREADGSDSLE
Sbjct:    1 MPREIITLQVGQCGNQVGAEFWKQLCAEHGISADGLVADFASGGHDRKDVFFYQADDEHYVPRALLLDLEPRVINSILNSGYRNLYNPENFFTSKDGGGAGNNWASGYAQGDQHHDVLMDMIDREADGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A2D4CHG2_PYTIN (Tubulin gamma chain n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4CHG2_PYTIN)

HSP 1 Score: 218 bits (556), Expect = 6.800e-67
Identity = 101/133 (75.94%), Postives = 117/133 (87.97%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQ GQCGNQ+G EFWKQLC EHGIS DG + +YA+QG DRKDVFFYQADD+ Y+PRALL+DLEPRV+N IQ+  YR+L+NPEN FVSKEGGGAGNNWA+G+ Q E+ +D LM+MIDREADGSDSLE
Sbjct:    1 MPREIITLQTGQCGNQVGMEFWKQLCAEHGISPDGIVHDYATQGHDRKDVFFYQADDEHYIPRALLMDLEPRVVNMIQNSAYRNLYNPENYFVSKEGGGAGNNWASGYHQGEKHNDLLMEMIDREADGSDSLE 133          
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Match: A0A7C9CCA6_OPUST (Tubulin domain-containing protein (Fragment) n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7C9CCA6_OPUST)

HSP 1 Score: 206 bits (524), Expect = 3.000e-66
Identity = 99/133 (74.44%), Postives = 114/133 (85.71%), Query Frame = 0
Query:    1 MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDVFFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGAGNNWANGHRQAEEQHDYLMDMIDREADGSDSLE 133
            MPREIITLQVGQCGNQIG EFWKQLC EHGIS +G L+++A+QG DRKDVFFYQADD  Y+PRALL+DLEPRVIN IQ+  YR+L+N ENIFVS  GGGAGNNWA+G+ Q +   + +MDMIDREADGSDSLE
Sbjct:    1 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNSEYRNLYNHENIFVSDHGGGAGNNWASGYHQGKIVEEDIMDMIDREADGSDSLE 133          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6566.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLA9_ECTSI2.000e-7991.73Gamma tubulin n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A397DIA9_9STRA6.030e-7277.44Tubulin gamma chain n=2 Tax=Aphanomyces astaci Tax... [more]
A0A835Z905_9STRA6.500e-7175.48Tubulin gamma chain n=1 Tax=Tribonema minus TaxID=... [more]
A0A024TYX1_9STRA3.410e-6977.44Tubulin gamma chain n=13 Tax=Saprolegniaceae TaxID... [more]
H3HD81_PHYRM1.290e-6875.19Tubulin gamma chain n=1 Tax=Phytophthora ramorum T... [more]
A0A7S1SG93_9CHLO7.030e-6875.94Tubulin gamma chain (Fragment) n=1 Tax=Tetraselmis... [more]
F0WMZ0_9STRA1.050e-6777.44Tubulin gamma chain n=2 Tax=Albugo TaxID=65356 Rep... [more]
A0A5D6XYE4_9STRA1.520e-6777.44Tubulin gamma chain n=1 Tax=Pythium brassicum TaxI... [more]
A0A2D4CHG2_PYTIN6.800e-6775.94Tubulin gamma chain n=3 Tax=Pythium TaxID=4797 Rep... [more]
A0A7C9CCA6_OPUST3.000e-6674.44Tubulin domain-containing protein (Fragment) n=5 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002454Gamma tubulinPRINTSPR01164GAMMATUBULINcoord: 31..51
score: 58.63
coord: 116..131
score: 70.7
IPR000217TubulinPRINTSPR01161TUBULINcoord: 52..71
score: 53.48
coord: 11..31
score: 63.58
coord: 108..132
score: 31.21
coord: 96..107
score: 58.26
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 1..133
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440Tubulin/FtsZ, GTPase domaincoord: 1..134
e-value: 3.0E-52
score: 179.7
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 2..133
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 4..133
e-value: 6.5E-37
score: 127.6
NoneNo IPR availablePANTHERPTHR11588:SF79TUBULIN GAMMA-2 CHAINcoord: 1..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6566contigC-tenellus_contig6566:452..2253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6566.1.1mRNA_C-tenellus_contig6566.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6566 452..2253 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6566.1.1 ID=prot_C-tenellus_contig6566.1.1|Name=mRNA_C-tenellus_contig6566.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=140bp
MPREIITLQVGQCGNQIGSEFWKQLCEEHGISNDGTLQEYASQGDDRKDV
FFYQADDDQYVPRALLLDLEPRVINKIQSEGYRHLFNPENIFVSKEGGGA
GNNWANGHRQAEEQHDYLMDMIDREADGSDSLEVRPTTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002454Gamma_tubulin
IPR000217Tubulin
IPR036525Tubulin/FtsZ_GTPase_sf
IPR003008Tubulin_FtsZ_GTPase