prot_C-tenellus_contig6560.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6560.2.1
Unique Nameprot_C-tenellus_contig6560.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length249
Homology
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A6H5KD26_9PHAE (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD26_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 6.110e-36
Identity = 71/93 (76.34%), Postives = 83/93 (89.25%), Query Frame = 0
Query:  147 YARVPLPTE-VMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATS 238
            ++RV LPT+ V E+ PTYVNAKQY RI+KRR+ARAKLEAR+KV  QRK++LHKSRHDHA RRVRGPGGRFLTKAEL+ +R QLEAQDPEGAT+
Sbjct:   73 FSRVALPTDQVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELEQYRKQLEAQDPEGATA 165          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: D7FQ09_ECTSI (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ09_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 2.280e-35
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 0
Query:  155 EVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATSSDPLPNN 245
            +V E+ PTYVNAKQY RI+KRR+ARAKLEAR+KV  QRK++LHKSRHDHA RRVRGPGGRFLTKAEL  +R QLEAQDPEGAT+  P P +
Sbjct:   34 QVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELDQYRKQLEAQDPEGATAPAPQPGS 124          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A7R9U4I3_9STRA (Nuclear transcription factor Y subunit n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4I3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.450e-26
Identity = 61/94 (64.89%), Postives = 72/94 (76.60%), Query Frame = 0
Query:  132 MMPYMVSAGSQLPANYARVPLPTEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFR 225
            M  Y+  A S  P   ++VPL  E+ +EQPTYVNAKQY RI+KRRQARAKLE++ K P  RK+YLHKSRH+HACRR RGP GRFLTKAEL+  R
Sbjct:  129 MQNYLHPAQSMYPVA-SKVPLNQEMSDEQPTYVNAKQYRRILKRRQARAKLESKWKAPS-RKTYLHKSRHEHACRRPRGPSGRFLTKAELEELR 220          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A835ZFN6_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN6_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.910e-25
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0
Query:  149 RVPLPTEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQ 227
            R+P     +EE PTYVNAKQY RI+KRR+ARAKLE R+++P  RKS+LHKSRHDHACRR RGPGGRFLTKAEL A   +
Sbjct:   80 RMPGAANELEENPTYVNAKQYKRILKRREARAKLEERRRIPAARKSFLHKSRHDHACRRKRGPGGRFLTKAELAAMAAE 158          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A1Y1Y6R6_9FUNG (Transcriptional activator HAP2 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6R6_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 1.920e-24
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 0
Query:  149 RVPLPTEVM---EEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATSS 239
            RVPLP+EV+   EE+P YVNAKQY RI+KRR ARAKLE R ++ + RK YLH+SRH HA RR RGPGGRFLT AE+       E ++ +G   S
Sbjct:    3 RVPLPSEVVSTGEEEPLYVNAKQYHRILKRRAARAKLEERNRIQRNRKPYLHESRHRHAMRRPRGPGGRFLTAAEIAELDKNKENENDDGQNDS 96          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A7S1UIV2_9STRA (Nuclear transcription factor Y subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIV2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.690e-24
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0
Query:  149 RVPLPTEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFR 225
            +VPL  +V +EQPT+VNAKQY RI+KRR ARAK+E + KVP  RK+YLHKSRH HACRR RGP GRFLTKAEL+A +
Sbjct:  131 KVPLNQDVSDEQPTFVNAKQYRRILKRRAARAKMEEKYKVPN-RKAYLHKSRHQHACRRPRGPTGRFLTKAELEALK 206          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A1A8JHE2_NOTKU (Nuclear transcription factor Y subunit (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8JHE2_NOTKU)

HSP 1 Score: 103 bits (258), Expect = 1.060e-23
Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 0
Query:  133 MPYMVSAGSQLPANYARVPLP-TEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATSSD 240
            M  MV  G+ +P    R+PLP  E++EE+P YVNAKQY RI+KRRQARAKLEA  K+P++R+ YLH+SRH HA +R RG GGRF +  + +   L L  Q   G T+ D
Sbjct:   84 MVMMVPGGAGVPT-MQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMQRKRGDGGRFFSPKDKEEMELALAQQQDVGQTAPD 191          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A671NMZ0_9TELE (Nuclear transcription factor Y subunit n=8 Tax=Otomorpha TaxID=186634 RepID=A0A671NMZ0_9TELE)

HSP 1 Score: 106 bits (264), Expect = 1.630e-23
Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0
Query:  136 MVSAGSQLPANYARVPLP-TEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATSSD 240
            MV  G  +PA   R+PLP TE++EE+P YVNAKQY RI+KRRQARAKLEA  K+P++R+ YLH+SRH HA +R RG GGRF +  E +   L ++ Q  +  T  +
Sbjct:  207 MVPGGGAVPA-IQRIPLPGTEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHKHAMQRKRGDGGRFFSPKEKEEMALAMQEQQDQNQTGDE 311          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: I0Z5M7_COCSC (Nuclear transcription factor Y subunit n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z5M7_COCSC)

HSP 1 Score: 105 bits (261), Expect = 2.010e-23
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 0
Query:  136 MVSAGSQLPANYARVPLPTEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRL--QLEAQDPEGATSSDPLPNNA 246
            + +A   +    AR+ LPTE+MEE+P YVNAKQY  I++RRQ RAK EA  K+ + R+ YLH+SRH+HA RR+RG GGRFLT  E +A  L  ++      GA SS P  + A
Sbjct:   84 VAAAAPTVAGGQARLALPTEIMEEEPVYVNAKQYHCILRRRQQRAKAEAENKLIKTRRPYLHQSRHNHATRRIRGAGGRFLTAQEARALELSGEISGNSNSGAASSQPSDSQA 196          
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Match: A0A1A8A5R7_NOTFU (Nuclear transcription factor Y subunit (Fragment) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8A5R7_NOTFU)

HSP 1 Score: 103 bits (256), Expect = 2.530e-23
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0
Query:  136 MVSAGSQLPANYARVPLP-TEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSRHDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATSSD 240
            MV  G  +P    R+PLP  E++EE+P YVNAKQY RI+KRRQARAKLEA  K+P++R+ YLH+SRH HA +R RG GGRF +  + +   L L  Q   G T+ D
Sbjct:   95 MVPGGGGVPT-MQRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMQRKRGDGGRFFSPKDKEEMELALAQQQDVGQTAPD 199          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6560.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD26_9PHAE6.110e-3676.34Nuclear transcription factor Y subunit n=1 Tax=Ect... [more]
D7FQ09_ECTSI2.280e-3574.73Nuclear transcription factor Y subunit n=1 Tax=Ect... [more]
A0A7R9U4I3_9STRA4.450e-2664.89Nuclear transcription factor Y subunit n=2 Tax=Pin... [more]
A0A835ZFN6_9STRA3.910e-2569.62Nuclear transcription factor Y subunit n=1 Tax=Tri... [more]
A0A1Y1Y6R6_9FUNG1.920e-2458.51Transcriptional activator HAP2 n=1 Tax=Basidiobolu... [more]
A0A7S1UIV2_9STRA6.690e-2470.13Nuclear transcription factor Y subunit n=2 Tax=Pha... [more]
A0A1A8JHE2_NOTKU1.060e-2352.29Nuclear transcription factor Y subunit (Fragment) ... [more]
A0A671NMZ0_9TELE1.630e-2352.83Nuclear transcription factor Y subunit n=8 Tax=Oto... [more]
I0Z5M7_COCSC2.010e-2349.56Nuclear transcription factor Y subunit n=1 Tax=Coc... [more]
A0A1A8A5R7_NOTFU2.530e-2352.83Nuclear transcription factor Y subunit (Fragment) ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..113
NoneNo IPR availableGENE3D6.10.250.2430coord: 158..219
e-value: 3.9E-30
score: 106.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..248
NoneNo IPR availablePANTHERPTHR12632:SF6NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHAcoord: 11..222
IPR001289Nuclear transcription factor Y subunit APRINTSPR00616CCAATSUBUNTBcoord: 161..183
score: 78.02
coord: 192..215
score: 71.06
IPR001289Nuclear transcription factor Y subunit ASMARTSM00521cbf3coord: 157..218
e-value: 1.8E-31
score: 120.6
IPR001289Nuclear transcription factor Y subunit APFAMPF02045CBFB_NFYAcoord: 160..215
e-value: 1.6E-25
score: 89.5
IPR001289Nuclear transcription factor Y subunit APANTHERPTHR12632TRANSCRIPTION FACTOR NF-Y ALPHA-RELATEDcoord: 11..222
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 158..218
score: 33.146
IPR018362CCAAT-binding factor, conserved sitePROSITEPS00686NFYA_HAP2_1coord: 163..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6560contigC-tenellus_contig6560:1084..3738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6560.2.1mRNA_C-tenellus_contig6560.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6560 1084..4289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6560.2.1 ID=prot_C-tenellus_contig6560.2.1|Name=mRNA_C-tenellus_contig6560.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=249bp
MEHPQQAAGLQQQQMQQQQHQQQQFQQHRQHQPLQQESHHHQQHQQQQQQ
QQQHQHQKQKQEVQQHLQQQQKQEVQQHLQQQQEATQHIQQHQHQLEAQH
HEQQHQAEALQAQQQQMMMYAAAMQQNPAMMMMPYMVSAGSQLPANYARV
PLPTEVMEEQPTYVNAKQYSRIIKRRQARAKLEARKKVPQQRKSYLHKSR
HDHACRRVRGPGGRFLTKAELKAFRLQLEAQDPEGATSSDPLPNNAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001289NFYA
IPR018362CCAAT-binding_factor_CS