prot_C-tenellus_contig656.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig656.1.1
Unique Nameprot_C-tenellus_contig656.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length1008
Homology
BLAST of mRNA_C-tenellus_contig656.1.1 vs. uniprot
Match: D7FLH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH4_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 3.150e-110
Identity = 352/1170 (30.09%), Postives = 515/1170 (44.02%), Query Frame = 0
Query:   15 ISGNSDIVSACFALPYERRLVLGMEDGHILLVNYITGLVLDKCRPHTSEVTQIIYCGWCKTIISSDYSGGLAVTSEVQCKLKELHVWGFQYLDLIADVKQKPSEPATGLDFLDQYSLIFLGDLTSVGIWHLDMDMLKVAFVHKIRLPATKEGIT-DTLTSIGVHSWKLSNDSDF---DSYFKHTKGSEDEEDDDISSM-----RSESGDVQEGGL--GHETKGGDDKRCEQDYLDDN--------------EYSDGKATIALGTDNGQIICWTVKNILDA-LPHVKRLKIRAVPDADCPALLASFNPFTTTVKPRVRILSHAPILLQAMFFPMMGSLYHLRKGFISKTSISECNNHSEGGGEDANTSF----------------EYLSTTTPEYLPHTSLWQAHIGPVSTIKSVTTPPCFYSQGEDGYQRSWSLSGEMLGQFTLPNTSEHQVRTRLFRNPQWRFFVNSVQVQGHHEMLTHRLLKEA----------KILESKNDSHAYQLSM-------ARAVNSSSCNKT-----------------------------------------KKGDCTFYDPEVQIETAGVHEVNSKNNTAKRVKVSDIKEIKRADTTSATGQAEMEVMERQIIVEESAQQPETSEGHWYLNNESSQVSPLLRQLYRSESPGTS------MLIDSHNPTSGSVGS--IGGQH------GPRKGLIGRHRGCFRPQLTFTSAFSNLSVRRGVEMGFYGREEYVRLDVISKNKSRVAAYNRIVEQKQGSSPAPMTQTMRLLHIEF-HLHLKLFNVANMCLSTQTSHDIGLNGERENLNKCNC--------HESTVTTTSSNTSL---MTESQSGAAPTTS---------------------------------PPSRQVQMYKHAAKEFSRGHSAGQTMWRDIQSE----SVSTKSRRSYTRGKSAPLLIQSISEGTRLPLFALDLLCMSDSTGLSLPSL------------------VGEEDSTVPFKDEGDHRKVRSASGNRKGECSLHTVGQGGRSKGPTSVFDSISRDS-GRGLSSKGSITTVSINQ------VHVLCRGCTEPHNLTIYLIKKNAIMLMQ----VPFAWEWDWCSRPVSAIPAEHVNRLMHRVEDESH---GET------ATTSIGN 983
            +S ++DIVSACFALP+ERRL+LG EDG +LLVNY+TG +LD+ +PH++EVTQ+ YC   K IIS+DY GG+ +TSE+QCKLKEL V GFQ+LD +A   Q   EP+TGL FLD YS+I LGDLT V  WHLDM+  K+    K+ +PA   G++ D L SIGV   + S  +D    +S  +H   +   E + +        R +S D  + G   G  TK   D+  EQ     +              EY +G+  IALGT+ G++ CW ++++L++    +  LK+R VPD+ CPAL +SFNP++  V+P+ +     P+   A     +G         +  +      ++  G G  A +                  E  S   PE     ++WQ H G VS I S + PPCF++ GEDGYQR+WS+ G++LGQF LPN SE   + RLF++  W F V++V+V+  HE +T  LL E           +   S+  S  Y+  +       A A  S S   T                                         + GDC   D +     AG  E  +            +   +R +  +A  + + E   RQ+ +        T E H   +  +S  SP   Q     S G +      +  DS++  +   G     G H        RKG + R         T T AFS  SVR G  +G+YGREE   L  ISKN SR+A YNR+ E KQG++    +  + +  +   H        + M LS+ T+  + L+GE  +L +             +TV +   +T+      ES  G  P                                    PPSR V+MY++AA+E+ RG SAGQ MW D+Q +       ++ RR    G+        +  GT      LDL   S ST   LP +                   G E S +   D+     +    G      S    G+GG     ++  D  +    GR  +  G  T V++N+       +   R        T  ++    + L+     +P  W WDWCSRP+SA+PA+ +  L  + +D+     GE       AT SIG+
Sbjct:  271 VSPSADIVSACFALPFERRLILGTEDGKLLLVNYVTGAILDETQPHSAEVTQMAYCKATKMIISADYHGGVVITSEIQCKLKELQVLGFQHLDYVAAAVQSVGEPSTGLAFLDGYSIIALGDLTRVCFWHLDMETFKLTCFAKLSVPAETLGLSLDVLNSIGVLRMEKSTANDSRSAESQQQHGGSAGPREAEVVGETGGDRDRGDSADTDQAGKKRGDATK--KDRIPEQKPSVSSATSAASSGGAKITEEYDEGEVWIALGTERGRLACWALEDVLESDATLIPGLKLRPVPDSLCPALRSSFNPYSLNVEPK-KSSQAPPVFAAAATGVNVGHSIGSASASVDASGSGVAESYRRGDGSVAESGATGTSGLIGEACFGDDDEDCSWRVPEASAPKAVWQGHSGAVSRIGSCSQPPCFFTLGEDGYQRTWSVKGKVLGQFALPNASETHHKRRLFQDIGWSFLVDTVRVRPLHEEMTAGLLDEVERRRAQKTSRRSTSSRGGSSFYKTVLDATSAAPAAAPPSPSATSTPQTVTFGERTASSGPLVAGRAASAPVGVGSHPSGAAATSPARPGDCQENDRDALA--AGRSERGAAGEAVAEPNPLAVTAPRRTEAAAAA-RRQAEAERRQVALA-------TIEKHRSCHRAASACSPAAAQTDTVPSSGVNQEGRVRLARDSNSVATTLTGRPVSSGDHLGAARAADRKGKLSR--------TTMTRAFSAQSVRSGATLGYYGREELNVLSAISKNPSRIAVYNRVTEAKQGNNGGENSPEIAVAPVPSPHRRRPRTTPSTMRLSSSTA-ALSLSGESSSLTRSPSXXXXGKQQRSATVLSPPPSTAADDSRAESGEGVRPAAGLAYAGDGKETPLGAMIGPGVGFGLNVGVMSEQPPPSRTVKMYRNAAREYGRGASAGQAMWMDLQRDVPVARTGSRCRRDIHSGR-------HVGGGTTSAT-VLDLSSSSTSTFQDLPQIGNTSASEKVSWGARDDSGTGPEGSDLEDSDDEVQAILELEGGGVGSGSSTARHGRGGVGGVASAANDWFAATRHGRDDAVPGG-TRVALNRGPGWEDTYAFRRSTARRAIKTSRILSGKKMPLLSSAATLPGKWNWDWCSRPLSALPADRIEYLQSKFDDDMSAPFGEARRPTSAATISIGD 1409          
BLAST of mRNA_C-tenellus_contig656.1.1 vs. uniprot
Match: A0A6H5JHV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV9_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 6.380e-56
Identity = 300/1116 (26.88%), Postives = 445/1116 (39.87%), Query Frame = 0
Query:   95 LKELHVWGFQYLDLIADVKQKPSEPATGLDFLDQYSLIFLGDLTSVGIWHLDMDMLKVAFVHKIRLPATKEGIT-DTLTSIGVHSWKLSNDSDFDS-----YFKHTKGSEDEED------------DDISSMR--------------SESGDVQEGGLGHETKGGDDKR---CEQDYLDDNEYS-------------------DGKATIALGTDNGQIICWTVKNILDA-LPHVKRLKIRAVPDADCPALLASFNPFTTTVKPRVRILSHAPILLQAMFFPM-MGSLYHLRKGFISKTSISECNNHSEGGGEDANTSF----------------EYLSTTTPEYLPHTSLWQAHIGPVSTIKSVTTPPCFYSQGEDGYQRSWSLSGEMLGQFTLPNTSEHQVRTRLFRNPQWRFFVNSVQVQGHHEMLTHRLLKEAKILESKNDSHAYQLSMARAVNSSSCNKTKKGDCTFYDPEVQIETAG---VHEVNSKNNTAKRV-------------------------------------KVSDIKEIKRADTTS------ATGQAEME----------------VMERQIIVEESAQQPETSEGHWYLNNESSQVSPLLRQLYRSESPGTSMLIDSHNPTSGSVGSIGGQHGPRKGLIGR------HRGCFRPQ--------LTFTSAFSNLSVRRGVEMGFYGREEYVRLDVISKNKSRVAAYNRIVEQKQGSS------------------PAPMTQTMRLLHIEFHLHLKLFNVANMCLSTQTSHDIGLNGERENLNKCNCHESTVTTTSSNTS---LMTESQSGAAPTTS---------------------------------PPSRQVQMYKHAAKEFSRGHSAGQTMWRDIQSESVSTK-SRRSYTRGKSAPLLIQSISEGTRLPLFALDLLC--------MSDSTGLSLP---------------SLVGEEDSTVPFKDEGDHRKVRSASGNRKGE-CSLHTVGQGGRSKGPTSVFDSISRDS-GRGLSSKGSITTVSINQ------VHVLCRGCTEPHNLTIYLI--KKNAIMLMQ---VPFAWEWDWCSRPVSAIPAEHVNRLMHRVEDE 971
            +++L V GFQ+LD +A   Q   EP+TGL FLD+YS+I LGDLT V +WHLDM+  K+    K+ +PA   G++ D L SIGV   + S  +D  S     Y   +  S + E+             D+SS+                E+G  ++ G   ++     KR    ++D + DNE S                   +G+  IALGT+ G++ CW +++IL++    +   K+R VPD+ CPAL +SFNP++  V+PR    S AP    A    + +G L       ++ +      +   G G  A +                  E  S+  PE     ++WQ H G VS I S + PPCF++ GEDGYQR+WS+ G+    F L    + Q R RLFRN  W F V++V+V+  HE +T  LL E + L              RA  +S  + + +G  +FY   +   +A     H   S  +T + V                                     +  D +E  R    +      A G+A  E                  +RQ   E       T E H   +  +S  SP   Q   + S G +          G      G +     L GR      H G  R           T T AFS  SVR G  +G+YGREE   L  ISKN SR+A YNRI E+KQG+                   P  M  T+RL      L L   + +++  ST +S     NG+R+         STV +   +T+   L  ES  G  P T                                  PPSR  +MY++AA+E+ RG SAGQ MW    SE    + +RR     +    L+         P    D           ++ STG + P               +  G E S +   D+ + + +    G   G   S    G+GG     ++  D  +    GR  +  G  T V++++       +   R        +  ++  KKN  +L     +P  W WDWCSRP+SA+P + +  L+ + +DE
Sbjct:    1 MEQLQVLGFQHLDYVAAAVQSVGEPSTGLVFLDRYSIIALGDLTRVCLWHLDMETFKLTCFVKLSVPAGTMGLSLDVLNSIGVLRMEKSTATDSRSAESQHYDGGSAASREAEEAAYLNAAGVGSLGDLSSLPINPLSLMTLVFLVVGETGGDRDRGNSADSDQVRKKRGDVTKKDRIPDNEPSVSSAPSATSTGSAKPEGNDEGEVWIALGTERGRLACWALEDILESDATLMPGQKLRPVPDSLCPALRSSFNPYSLNVEPRKS--SQAPPAFAAAATGVNVGRLMGSVSASVNASGSGVAESDRGGNGSVAASGATGTSGLIGDACFGDDDEDCSSRVPEASARKAVWQGHSGAVSRIGSCSKPPCFFTLGEDGYQRTWSVKGKHTVLFLL----QTQPRARLFRNIGWSFLVDTVRVRPLHEEMTAALLDEVERL--------------RAQKTSRRSTSSRGGLSFYKTVLDATSAAPTAAHPSPSAISTPQSVTFGERMASSGPPVAGLAASTPASVGSHPSGAAATSPSRPGDCQENDRDALAAGRSKHGAAGEAVPEPNPLTVTAHRRTEAAVAAKRQEEAERRQAALATIEKHRSCHRAASARSPAAAQTSTAASSGVNQ--------EGKDRLARGSNSVATTLTGRPVSSIDHLGAARAADRKGNLSPTTMTRAFSEQSVRSGATLGYYGREEVKVLSAISKNPSRIAVYNRITEEKQGNGENSPEIAVAPVPSPRRRRPRTMPSTVRLSRSTAALSLGGED-SSLTQSTWSSS----NGKRQ-------RSSTVLSPPPSTAADNLRAESGEGVRPATGLAHAGGGEDTPLGAMIGPGVGLGLNVGVVSEQPPPSRTAKMYRNAAREYGRGASAGQAMWMFAVSEGHPPRPARRRRNEIRRRFRLVVKFYVHIAGPPSNWDHFGFRKSEDREVNRSTGRNTPIKKNAGVVSWGARDDAGTGPEGSDLDDSDD-EVQAIHELEGGGVGSGSSTARHGRGGVEGVASAANDWFAATRHGRDDAVPGG-TRVALSRGPGWEDTYAFKRSTARRAIKSSRIVSGKKNMPLLSSAATLPGKWNWDWCSRPLSALPVDRIEYLLSKFDDE 1074          
BLAST of mRNA_C-tenellus_contig656.1.1 vs. uniprot
Match: A0A8J2WQF6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQF6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.350e-5
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   21 IVSACFALPYERRLVLGMEDGHILLVNYITGLVLDKCRPHTSEVTQIIYCG-WCKTIISSDYSGGLAVTSEVQCKLKEL 98
            I +A F +P ERR+VLG E+G +L+VNYI+G V+ K R HT E+  + + G   + +IS+     L V  E    L+ L
Sbjct:  743 ISAAAFDVPRERRVVLGTENGEVLVVNYISGEVISKIRAHTGEIVGVAHGGDKARCVISAGRDNCLKVHQETSKGLELL 821          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig656.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLH4_ECTSI3.150e-11030.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHV9_9PHAE6.380e-5626.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2WQF6_9STRA8.350e-540.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..283
e-value: 4.7E-7
score: 31.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..610
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 10..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig656contigC-tenellus_contig656:4883..15078 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig656.1.1mRNA_C-tenellus_contig656.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig656 1547..16475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig656.1.1 ID=prot_C-tenellus_contig656.1.1|Name=mRNA_C-tenellus_contig656.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1008bp
MQHPASTTRNLRTSISGNSDIVSACFALPYERRLVLGMEDGHILLVNYIT
GLVLDKCRPHTSEVTQIIYCGWCKTIISSDYSGGLAVTSEVQCKLKELHV
WGFQYLDLIADVKQKPSEPATGLDFLDQYSLIFLGDLTSVGIWHLDMDML
KVAFVHKIRLPATKEGITDTLTSIGVHSWKLSNDSDFDSYFKHTKGSEDE
EDDDISSMRSESGDVQEGGLGHETKGGDDKRCEQDYLDDNEYSDGKATIA
LGTDNGQIICWTVKNILDALPHVKRLKIRAVPDADCPALLASFNPFTTTV
KPRVRILSHAPILLQAMFFPMMGSLYHLRKGFISKTSISECNNHSEGGGE
DANTSFEYLSTTTPEYLPHTSLWQAHIGPVSTIKSVTTPPCFYSQGEDGY
QRSWSLSGEMLGQFTLPNTSEHQVRTRLFRNPQWRFFVNSVQVQGHHEML
THRLLKEAKILESKNDSHAYQLSMARAVNSSSCNKTKKGDCTFYDPEVQI
ETAGVHEVNSKNNTAKRVKVSDIKEIKRADTTSATGQAEMEVMERQIIVE
ESAQQPETSEGHWYLNNESSQVSPLLRQLYRSESPGTSMLIDSHNPTSGS
VGSIGGQHGPRKGLIGRHRGCFRPQLTFTSAFSNLSVRRGVEMGFYGREE
YVRLDVISKNKSRVAAYNRIVEQKQGSSPAPMTQTMRLLHIEFHLHLKLF
NVANMCLSTQTSHDIGLNGERENLNKCNCHESTVTTTSSNTSLMTESQSG
AAPTTSPPSRQVQMYKHAAKEFSRGHSAGQTMWRDIQSESVSTKSRRSYT
RGKSAPLLIQSISEGTRLPLFALDLLCMSDSTGLSLPSLVGEEDSTVPFK
DEGDHRKVRSASGNRKGECSLHTVGQGGRSKGPTSVFDSISRDSGRGLSS
KGSITTVSINQVHVLCRGCTEPHNLTIYLIKKNAIMLMQVPFAWEWDWCS
RPVSAIPAEHVNRLMHRVEDESHGETATTSIGNETNTWDCFATGEREQPQ
VEQRSGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf