prot_C-tenellus_contig6534.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6534.1.1
Unique Nameprot_C-tenellus_contig6534.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length145
Homology
[Close]
BLAST of mRNA_C-tenellus_contig6534.1.1 vs. uniprot
Match: D8LRA1_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA1_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.350e-40
Identity = 79/143 (55.24%), Postives = 94/143 (65.73%), Query Frame = 0 
Query:    1 MPMVRDKTLGMFIRDVLLGKDGLGQAPLRDGWVELRKEYATYLENGHLYLLRTDVFLPPESSYGIEAEGTEVPLHGASVMVGSWEISTSKGERLTLEEAASHKRGRLPGLSTPPFQTMEEFATGVMSYMVAVPDTEEARLTVQ 143
            MPMVRDKTLGMF+RD L         PL+D WVELRKEY  +L  G LY+ R  VFLPP +SYG +AEGT VPL G  V VG W I+T++ E    +E    +RGR P  +  PF +MEE   G +SY+VAVPDT EA LTVQ
Sbjct:  275 MPMVRDKTLGMFVRDTLQRDT---HVPLKDKWVELRKEYVGFLCGGSLYIFRMGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTAETETKLPQELQGFERGRPPAANALPFASMEELMDGELSYVVAVPDTPEAALTVQ 414
[Close]
BLAST of mRNA_C-tenellus_contig6534.1.1 vs. uniprot
Match: A0A6H5L0I6_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.940e-39
Identity = 78/143 (54.55%), Postives = 94/143 (65.73%), Query Frame = 0 
Query:    1 MPMVRDKTLGMFIRDVLLGKDGLGQAPLRDGWVELRKEYATYLENGHLYLLRTDVFLPPESSYGIEAEGTEVPLHGASVMVGSWEISTSKGERLTLEEAASHKRGRLPGLSTPPFQTMEEFATGVMSYMVAVPDTEEARLTVQ 143
            MPMVRDKTLGMF+RD L         PL+D WVELRKEY  +L  G LY+ R  VFLPP +SYG +AEGT VPL G  V VG W I+T++ E    +E    +RGR P  +  PF +M+E   G +SY+VAVPDT EA LTVQ
Sbjct:  410 MPMVRDKTLGMFVRDTLQRDT---HVPLKDKWVELRKEYVGFLCGGSLYIFRMGVFLPPNTSYGEKAEGTPVPLDGGLVQVGPWRITTAETETKPPQELQDFERGRPPAANALPFASMDELMDGELSYVVAVPDTPEAALTVQ 549
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6534.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRA1_ECTSI1.350e-4055.24tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
A0A6H5L0I6_9PHAE1.940e-3954.55tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6534contigC-tenellus_contig6534:583..3640 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6534.1.1mRNA_C-tenellus_contig6534.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6534 329..5088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6534.1.1 ID=prot_C-tenellus_contig6534.1.1|Name=mRNA_C-tenellus_contig6534.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=145bp
MPMVRDKTLGMFIRDVLLGKDGLGQAPLRDGWVELRKEYATYLENGHLYL
LRTDVFLPPESSYGIEAEGTEVPLHGASVMVGSWEISTSKGERLTLEEAA
SHKRGRLPGLSTPPFQTMEEFATGVMSYMVAVPDTEEARLTVQV*
back to top