prot_C-tenellus_contig65.6.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig65.6.2
Unique Nameprot_C-tenellus_contig65.6.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length629
Homology
BLAST of mRNA_C-tenellus_contig65.6.2 vs. uniprot
Match: A0A6H5KQY7_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY7_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 9.730e-89
Identity = 214/513 (41.72%), Postives = 293/513 (57.12%), Query Frame = 0
Query:   95 KEREVVLSDWLEESL-------LDHYVQRDKTPSMGL-ELVNLSGQQPEEHRQGDQDDYSSAPFRFHLLVQHVWSELTKDDQLAYLGPVGQAKVKRVLSVLAAYGALREHPQQSGVASPQKAFSEMDIDSDGQVTFEEFVQWYSKSDSHERQRSEVQASALVSGRALSSDVGQNIEEAQSYPGSEQGEGDISGDGVKLRTGWGSQGSSNMVLVSDYAAYTGDRGEARKMTAMEEDTIRERWLAEELAEDVNTPSAEQ-PWSSMANGLKQILEVAHGVEERTMTAEERCSIREQWLAEEFDEGVCTPISIEQPQISTSHDLKQGLEVMQSSKERSMTHEEKNVLRERWLAGDLAENVYTPSVEQP-RNSASSDLKQALEIVQILVKAHADSDTIIAALASSIIRNPLGRYNLGVIEEQFGPIIRGIVEDRLVLERLPEPPSSSSFVTLQKAKGMRPLLDMDDHDAKLLREFLVHSSKDARAVVVHMADLVYRLRLPSDTPIYHRQNLAIEALQV 597
            K+  VVLSDWL+ES        L     R++  + GL E+V       +E   GD     SAPFRF  L+Q +W+ L++  QL YLG  G+AKVK+ LSVLAAY ALREHP Q+GV +PQ+AFSEMD + DG+V+F+EFV+WYS S + + +  ++   A V   +  S                   G I+   V L        S +  L+S  +    D  ++  +T+        R L        N P+A++ P+S+ A      +    G  +    A    S  + WL                  +S +                  T EEK   RERWL+G  AE     S   P  +SA+ DL++ALE++++LV+AHAD DT++AALAS IIRNP+GRYNL VIEEQFGPIIRGIVEDRL+LERLP+P SS+S++++Q++ G++P+LD+DDH AKL+R++LVHSS+DARAVVVHMADL  RLR PS TP + R  LA+EALQ+
Sbjct:  140 KDSVVVLSDWLDESQAPLGLAGLPGLGNREEHLNQGLVEVVGSQAGGDDEDGVGD----GSAPFRFQQLIQQMWATLSRGHQLEYLGNEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNRDGEVSFDEFVRWYSMSTALDEKPQQLPVQADVGPASARSS-----------------NGGIAAPEVAL--------SRSKTLLSTGSRLLADVEQSLALTS--------RQLG-------NMPAADKLPFSAAA------IPTDGGPNDNVGAAAP--SPGKAWLG-----------------LSAAXXXXXXXXXX-------XTEEEKEAARERWLSGAAAEPGAVGSGTDPVDDSATKDLEKALEMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQPTSSASYLSIQQSFGVKPVLDLDDHHAKLMRDYLVHSSRDARAVVVHMADLTCRLRDPSKTPAHTRHTLALEALQL 576          
BLAST of mRNA_C-tenellus_contig65.6.2 vs. uniprot
Match: D7G573_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G573_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 4.720e-76
Identity = 217/603 (35.99%), Postives = 287/603 (47.60%), Query Frame = 0
Query:   92 DADKEREVVLSDWLEESL-------LDHYVQRDKTPSMGL-ELVNLSGQQPEEHRQGDQDDYSSAPFRFHLLVQHVWSELTKDDQLAYLGPVGQAKVKRVLSVLAAYGALREHPQQSGVASPQKAFSEMDIDSDGQVTFEEFVQWYSKSDSHERQRSEVQASALVSGRALSSDVGQNIEEAQSYPGSEQ-GEGDISGDGVKLRTGWG--SQGSSNMVLVSDYAAYTGDRGEARKMTAMEEDTIRERWLAEELAEDVNTPSAEQPWSSMANGLKQILEVAHGVEERTMTAEERCSIREQWLAEEFDEGVCTPISIEQPQISTSHDLKQGLEVMQSSKERSMTHEEKNVLRERWLAGDLAENVYTPSVEQP-RNSASSDLKQALEIVQILVKAHADSDTIIAALASSIIRNPLGRYNLGVIEEQFGPIIRGIVEDRLVLERLPEPPSSSSFVTLQKAK-------------------------------------------------------------------------------------GMRPLLDMDDHDAKLLREFLVHSSKDARAVVVHMADLVYRLRLPSDTPIYHRQNLAIEALQV 597
            D  ++  VVLSDWL+ES        L     R++  + GL E+V       +E   GD     SAPFRF  L+Q +W+ L++ +QL YLG  G+AKVK+ LSVLAAY ALREHP Q+GV +PQ+AFSEMD +SDG+V+F+EFV+WYS S                   AL     Q  E+A   P S + G G ++   V L       S GS  +V V    A T     +R++T                    N P+A++   S A                               A   D G    +    P    +                  T EEK   RERWL+G  AE     S   P  +SA+ DL++ALE++++LV+AHAD DT++AALAS IIRNP+GRYNL VIEEQFGPIIRGIVEDRL+LERLP+P S++S++++Q+                                                                                       G++P+LD+DDH AKL+R++LVHSS+DARAVVVHMADL  RLR PS TP + R  LA+EALQ+
Sbjct:   64 DDVEDSVVVLSDWLDESQASLGLPGLPGLGNREEHLNQGLVEVVGSQANGDDEDGVGD----GSAPFRFQQLIQQMWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQTGVENPQQAFSEMDFNSDGEVSFDEFVRWYSMS------------------TALDEKPQQLPEQANVGPASARSGNGGVTAPEVALTRSKTLLSTGSRLLVDVEQSLALT-----SRQLT--------------------NMPAADKSPRSAA-------------------------------APPTDGGPNHNVGAAAPSPGKAWLGLSAAPXXXXXXXXXXTEEEKEAARERWLSGAAAEPGAVGSGTDPVDDSAAKDLEKALEMLRVLVRAHADVDTLVAALASCIIRNPMGRYNLEVIEEQFGPIIRGIVEDRLLLERLPQPTSAASYLSIQQVTCDCKGAGFLWRLVENCRVPLSSLIRWRVGAHHPMMAWRIYLHVVNPLFCCSTAVDMYLYVRVSHRMHGRRARAGSAFTCSPPQSFGVKPVLDLDDHHAKLMRDYLVHSSRDARAVVVHMADLTCRLRDPSKTPAHTRHTLALEALQL 588          
BLAST of mRNA_C-tenellus_contig65.6.2 vs. uniprot
Match: A0A835YJV9_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV9_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.610e-45
Identity = 172/574 (29.97%), Postives = 222/574 (38.68%), Query Frame = 0
Query:  144 DYSSAPFRFHLLVQHVWSELTKDDQLAYLGPVGQAKVKRVLSVLAAYGALREHPQQSGVASPQKAFSEMDIDSDGQVTFEEFVQWYSKSDSHERQRSEVQASALVSGRALSSDVGQNIEEAQSYPGSEQGEGDISGDGVKLRTGWGSQGSSNMVLVSDYAAYTGDRGEARKMTAMEEDTIRERWLAEELAEDVNTPSAEQPWSSMANGLKQILEVAHGVEERTMTAEERCSIR----------EQWLAEEFDEGVCTPISIEQPQISTSHDLKQGLEVMQSSKERSMTHEEKNVLRERWLAGD---LAENVYTPSVEQPRNSASSDLKQALEIVQILVKAHADSDTIIAALASS------------IIRNPLGRYNLGVIEEQFGPIIRGIVEDRLVLERLPEPPS---------------------------------------------------------------------------------SSSFVTLQKAKGMRPLLDMDDHDAKLLREFLVHSSKDARAVVVHMADLVYRLRLPSDT--------------PIYHRQNLAIEALQV 597
            D SSAPFRF  L+  +W EL K   L YLG  GQA+VKR + VLAA  ALREHP++ GV SP+K F+EMD DS+G+VTFEEFV+WY  S      R    A+AL   R    D G                                  S                                                    S +  G  Q+      +E   + A  R              E W     D G     S        S  L QG     SS +      EK  LR RWL+G                     +  L+ +LE+V+ILV   AD+DTI+AALA S            +I  P+G YNL VIEEQFGP++RGIVEDR++L+ L EP S                                                                                 S+S + +Q++ G+RP+LD+DDH+++LLRE+LVH S+D RAVVVHMA L+ RLR   D               P + R +LA+EALQ+
Sbjct:  104 DLSSAPFRFQRLISAMWRELRKGGALEYLGSEGQARVKRAMIVLAAMAALREHPRRDGVLSPKKIFAEMDFDSNGEVTFEEFVRWYEGS-----ARRGAAAAALSPARLRGRDTGS---------------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVFQGADQLWRQVQDLEPAPVAAGNRNDPAGSDRSAGAGAEAWWGRGPDAGARASGSA-----GGSGQLVQG-----SSAQEGFAAREKERLRARWLSGGGEXXXXXXXXXXXXXXXXGVTDGLQHSLEVVKILVGMEADADTIVAALACSSAQRPQMAQDRGLIGGPIGPYNLEVIEEQFGPVVRGIVEDRVLLDSLAEPTSYTHSDTIGARFSLQAQPDILSPFSSLSLLXXXXXXXXXXXXXXXXXXPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHSSASQMVIQRSTGVRPILDLDDHNSRLLREYLVHRSRDVRAVVVHMAQLLQRLRGMGDVTDVTAFNGRGGGVMPAHLRHHLALEALQL 629          
BLAST of mRNA_C-tenellus_contig65.6.2 vs. uniprot
Match: A0A4D9D784_9STRA (EF-hand domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D784_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.430e-7
Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query:  143 DDYSSA---PFRFHLLVQHVWSELTKDDQLAYLGPVGQAKVKRVLSVLAAYGALREHPQQS-GVASPQKAFSEMDIDSDGQVTFEEFVQWYSKSDSHERQRSEVQASALVSGRALSSDVGQNIEE 263
            DD  +A   P R    V  VW E+ + D++AYL    + +VK+ L VLA +  L +HP Q     S +  F + D++ DGQ++FEEF++WY+ S   +  +S       + GR +S + G + EE
Sbjct:  158 DDGQAAQQLPVRLQREVNLVWYEIQRGDRMAYLRAEERERVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTASYDDQGLKS-------LEGRDISEEEGGSTEE 275          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig65.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KQY7_9PHAE9.730e-8941.72EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G573_ECTSI4.720e-7635.99GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YJV9_9STRA2.610e-4529.97EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A4D9D784_9STRA2.430e-734.40EF-hand domain-containing protein n=2 Tax=Monodops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 204..232
e-value: 0.001
score: 28.3
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 206..230
e-value: 3.6E-6
score: 26.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 200..235
score: 12.421
NoneNo IPR availableGENE3D1.10.3210.10Hypothetical protein af1432coord: 409..602
e-value: 3.2E-11
score: 45.2
NoneNo IPR availableGENE3D1.10.238.10coord: 177..247
e-value: 1.5E-6
score: 29.9
NoneNo IPR availablePFAMPF13328HD_4coord: 436..597
e-value: 2.4E-12
score: 46.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..282
NoneNo IPR availableSUPERFAMILY109604HD-domain/PDEase-likecoord: 447..597
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 213..225
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 205..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig65contigC-tenellus_contig65:23312..26117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig65.6.2mRNA_C-tenellus_contig65.6.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig65 23043..29187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig65.6.2 ID=prot_C-tenellus_contig65.6.2|Name=mRNA_C-tenellus_contig65.6.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=629bp
MTRQSWQWQSETQTFWCLVFLLVDFPLKINSFQWGSQKGLNRQTLWVPQQ
ALSTFWSLHLNTLTPTPPSYGSKWYIKSVCRTCAAVRSTSLDADKEREVV
LSDWLEESLLDHYVQRDKTPSMGLELVNLSGQQPEEHRQGDQDDYSSAPF
RFHLLVQHVWSELTKDDQLAYLGPVGQAKVKRVLSVLAAYGALREHPQQS
GVASPQKAFSEMDIDSDGQVTFEEFVQWYSKSDSHERQRSEVQASALVSG
RALSSDVGQNIEEAQSYPGSEQGEGDISGDGVKLRTGWGSQGSSNMVLVS
DYAAYTGDRGEARKMTAMEEDTIRERWLAEELAEDVNTPSAEQPWSSMAN
GLKQILEVAHGVEERTMTAEERCSIREQWLAEEFDEGVCTPISIEQPQIS
TSHDLKQGLEVMQSSKERSMTHEEKNVLRERWLAGDLAENVYTPSVEQPR
NSASSDLKQALEIVQILVKAHADSDTIIAALASSIIRNPLGRYNLGVIEE
QFGPIIRGIVEDRLVLERLPEPPSSSSFVTLQKAKGMRPLLDMDDHDAKL
LREFLVHSSKDARAVVVHMADLVYRLRLPSDTPIYHRQNLAIEALQVNQQ
CLLLSCSQFLVRIVFVCESHSSLHLSEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair