prot_C-tenellus_contig11650.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11650.1.1
Unique Nameprot_C-tenellus_contig11650.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length82
Homology
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: D7FWF5_ECTSI (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF5_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 6.510e-33
Identity = 58/75 (77.33%), Postives = 66/75 (88.00%), Query Frame = 0
Query:    7 AHTYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL 81
            A  Y+G      +L QAYRWI+DSRD+YT+ERLESLDDAFKLFRCHTIMNC+KTCPKHLNPGKAIA+IKKRV+AL
Sbjct:  210 ADKYLGPA----VLMQAYRWIDDSRDDYTKERLESLDDAFKLFRCHTIMNCTKTCPKHLNPGKAIANIKKRVHAL 280          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A836C854_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C854_9STRA)

HSP 1 Score: 122 bits (307), Expect = 9.010e-33
Identity = 55/63 (87.30%), Postives = 60/63 (95.24%), Query Frame = 0
Query:   19 LLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL 81
            +L QAYRWIEDSRDEYT+ERLE LDDAFKL+RCHTIMNCS+TCPKHLNPGKAIAHIKKR+ AL
Sbjct:  201 VLMQAYRWIEDSRDEYTRERLEQLDDAFKLYRCHTIMNCSQTCPKHLNPGKAIAHIKKRMMAL 263          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A835Z536_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z536_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.460e-32
Identity = 53/63 (84.13%), Postives = 60/63 (95.24%), Query Frame = 0
Query:   19 LLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL 81
            +L QAYRWIEDSRDE+T+ERLE LDDAFKL+RCHTIMNCS+TCPKHLNPGKAIAHIKKR+ A+
Sbjct:  203 VLMQAYRWIEDSRDEFTRERLEQLDDAFKLYRCHTIMNCSQTCPKHLNPGKAIAHIKKRMMAI 265          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A6H5JQA7_9PHAE (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQA7_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.510e-31
Identity = 52/60 (86.67%), Postives = 59/60 (98.33%), Query Frame = 0
Query:   22 QAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL 81
            +AYRWI+DSRD+YT+ERLE LDDAFKLFRCHTIMNC+KTCPKHLNPGKAIA+IKKRV+AL
Sbjct:  185 EAYRWIDDSRDDYTKERLELLDDAFKLFRCHTIMNCTKTCPKHLNPGKAIANIKKRVHAL 244          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A6U0WEA4_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WEA4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 6.640e-31
Identity = 55/73 (75.34%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    9 TYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL 81
            TY+G      +L QAYRWIEDSRD  T+ER+E LDDAFKL+RCHTIMNCSKTCPKHLNPGKAIAH+K+RV AL
Sbjct:  235 TYLGPA----VLMQAYRWIEDSRDAITRERIEQLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHVKQRVAAL 303          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: W7U0Z2_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0Z2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.180e-30
Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 0
Query:    7 AHTYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNA 80
            A  Y+G      +L QAYRWIEDSRDEYT+ERLE+LDD+FKL+RCHTIMNC+K CPKHLNPG+AIAHIKKR+ A
Sbjct:  211 ADKYLGPA----VLMQAYRWIEDSRDEYTKERLEALDDSFKLYRCHTIMNCTKVCPKHLNPGRAIAHIKKRLAA 280          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A7S1UAJ7_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAJ7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.630e-30
Identity = 54/75 (72.00%), Postives = 63/75 (84.00%), Query Frame = 0
Query:    7 AHTYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL 81
            A +Y+G      +L QA+RWIEDSRD  T++RLE LDDAFKL+RCHTIMNCSKTCPKHLNPGKAIAHIKKR+ +L
Sbjct:  242 ADSYLGPA----VLMQAFRWIEDSRDSITKKRLEQLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRMASL 312          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A7S0PK69_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PK69_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.060e-29
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    7 AHTYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRV 78
            A  Y+G      +L QAYRWIEDSRDE+T+ERLE LDDAFKL+RCHTIMNC+K CPKHLNPGKAIA+IKK++
Sbjct:  199 ADKYLGPA----VLMQAYRWIEDSRDEFTKERLEELDDAFKLYRCHTIMNCTKVCPKHLNPGKAIANIKKKL 266          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A7S1B7X7_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7X7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.900e-29
Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    7 AHTYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRV 78
            A +Y+G      +L QAYRWIEDSRD+ T+ERL  LDDAFKL+RCHTIMNCSK CPKHLNPGKAIAHIKK++
Sbjct:  208 ADSYLGPA----VLMQAYRWIEDSRDQMTEERLAQLDDAFKLYRCHTIMNCSKVCPKHLNPGKAIAHIKKKL 275          
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Match: A0A348AYS8_9EUKA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Ophirina amphinema TaxID=2108040 RepID=A0A348AYS8_9EUKA)

HSP 1 Score: 112 bits (279), Expect = 7.540e-29
Identity = 50/61 (81.97%), Postives = 57/61 (93.44%), Query Frame = 0
Query:   19 LLWQAYRWIEDSRDEYTQERLESLDDAFKLFRCHTIMNCSKTCPKHLNPGKAIAHIKKRVN 79
            +L QAYRWI DSRDEYT+ERL SL+DAFKL+RCHTIMNCSKTCPK+LNPGKAIA IKKR++
Sbjct:  174 VLLQAYRWIADSRDEYTKERLRSLNDAFKLYRCHTIMNCSKTCPKNLNPGKAIAEIKKRIS 234          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11650.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWF5_ECTSI6.510e-3377.33Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A836C854_9STRA9.010e-3387.30Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A835Z536_9STRA7.460e-3284.13Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A6H5JQA7_9PHAE2.510e-3186.67Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A6U0WEA4_9STRA6.640e-3175.34Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
W7U0Z2_9STRA1.180e-3072.97Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S1UAJ7_9STRA8.630e-3072.00Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S0PK69_9STRA4.060e-2972.22Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S1B7X7_9STRA4.900e-2972.22Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A348AYS8_9EUKA7.540e-2981.97Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009051Alpha-helical ferredoxinGENE3D1.10.1060.10coord: 4..80
e-value: 8.5E-19
score: 69.4
NoneNo IPR availablePANTHERPTHR11921SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEINcoord: 20..76
NoneNo IPR availablePANTHERPTHR11921:SF44SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, MITOCHONDRIALcoord: 20..76
NoneNo IPR availableSUPERFAMILY46548alpha-helical ferredoxincoord: 17..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11650contigC-tenellus_contig11650:758..1003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11650.1.1mRNA_C-tenellus_contig11650.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11650 659..2447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11650.1.1 ID=prot_C-tenellus_contig11650.1.1|Name=mRNA_C-tenellus_contig11650.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=82bp
MHTHTHAHTYMGKISLWYLLWQAYRWIEDSRDEYTQERLESLDDAFKLFR
CHTIMNCSKTCPKHLNPGKAIAHIKKRVNAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009051Helical_ferredxn