prot_C-tenellus_contig11644.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig11644.1.2
Unique Name	prot_C-tenellus_contig11644.1.2
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	104

Homology

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: D8LGH0_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH0_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 3.810e-45
Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGE-WYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            MSIRLRQLI+KVR+CKTAAEER+VIA E ALIRTAFKEG+ P RARNVA+LLY+HM GE  YPSHFGQMEC+KLIASPGFP+KRVGYL LMLLLQEKDEV +
Sbjct:    1 MSIRLRQLIRKVRSCKTAAEERAVIATEGALIRTAFKEGNDPTRARNVARLLYMHMFGEDGYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEVLM 102

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A061RPQ4_9CHLO (Ap-1 complex subunit gamma-2-like n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RPQ4_9CHLO)

HSP 1 Score: 143 bits (361), Expect = 3.060e-41
Identity = 75/101 (74.26%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            MSI+LR LIK VR  KTAAEERSVIAKE A +RTAFKE D   R RNVAKL+YIHMLG  YP+HFGQMEC+KLIASP +PEKR+GYLALMLLL E+ EV +
Sbjct:    1 MSIKLRDLIKAVRQAKTAAEERSVIAKESAALRTAFKEQDSVYRHRNVAKLMYIHMLG--YPAHFGQMECLKLIASPSYPEKRIGYLALMLLLDERQEVLM 99

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A7S3XHK3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHK3_HETAK)

HSP 1 Score: 145 bits (367), Expect = 5.520e-40
Identity = 76/101 (75.25%), Postives = 88/101 (87.13%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            MS+RLR+LI+ VRACKTAAEER+VI++ECALIRTA KE +   R RNVAKLLYIHMLG  YPSH+GQME +KLIASPGFPEKR+GYL LMLLL EK+EV +
Sbjct:    1 MSMRLRELIRAVRACKTAAEERAVISQECALIRTAIKEENEAMRHRNVAKLLYIHMLG--YPSHWGQMEALKLIASPGFPEKRMGYLTLMLLLTEKEEVLM 99

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A7C9DDW2_OPUST (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DDW2_OPUST)

HSP 1 Score: 136 bits (343), Expect = 2.010e-39
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 0

Query:    4 RLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            RLR +I+ +RACKTAAEER+V+ KECA IR A  E D   R RN+AKL++IHMLG  YP+HFGQMEC+KLIASPGFPEKR+GYL LMLLL E+ EV +
Sbjct:    9 RLRDMIRAIRACKTAAEERAVVRKECAAIRAAISENDPEYRHRNMAKLMFIHMLG--YPTHFGQMECLKLIASPGFPEKRLGYLGLMLLLDERQEVLM 104

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A7S2WL96_9STRA (AP-1 complex subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL96_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.720e-39
Identity = 77/99 (77.78%), Postives = 86/99 (86.87%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEV 99
            MSI+LR+LI+ VRACKTA EER+VI+KECALIRTAFK+ +   R RNVAKLLYIHMLG  YPSHFGQMEC+KLIASP FPEKR+GYLALMLLL E  EV
Sbjct:   17 MSIKLRELIRAVRACKTAQEERAVISKECALIRTAFKDNNIQFRHRNVAKLLYIHMLG--YPSHFGQMECLKLIASPNFPEKRIGYLALMLLLNETAEV 113

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A482RW17_9ARCH (Adaptin_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW17_9ARCH)

HSP 1 Score: 138 bits (347), Expect = 1.170e-38
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEV 99
            MSI+LR LI+ VRACKTAAEER+VI+KECALIRTA KE D   R RNVAKLL+IHMLG  YP+HFGQMEC+KLI++  FP+KRVGYL L LLL E+ EV
Sbjct:    1 MSIKLRDLIRAVRACKTAAEERAVISKECALIRTAIKEEDEQFRQRNVAKLLFIHMLG--YPTHFGQMECLKLISAQSFPDKRVGYLGLTLLLNEQTEV 97

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A1D6LLP5_MAIZE (AP-1 complex subunit gamma-1 n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A1D6LLP5_MAIZE)

HSP 1 Score: 134 bits (337), Expect = 1.920e-38
Identity = 65/98 (66.33%), Postives = 80/98 (81.63%), Query Frame = 0

Query:    4 RLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            RLR +I+ +RACKTAAEER+V+ +ECA IR A  EGD   R RN+AKL++IHMLG  YP+HFGQMEC+KLIA+ GFPEKR+GYL LMLLL E+ EV +
Sbjct:   13 RLRDMIRAIRACKTAAEERAVVRRECAAIRAAISEGDQDYRHRNMAKLMFIHMLG--YPTHFGQMECLKLIAAAGFPEKRIGYLGLMLLLDERQEVLM 108

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: K0T3C6_THAOC (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T3C6_THAOC)

HSP 1 Score: 134 bits (337), Expect = 2.160e-38
Identity = 67/101 (66.34%), Postives = 85/101 (84.16%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            MS++LR LI++VRACKTAAEER+VIAKE A+IRTA +E     R RNVAKLL++HMLG  YP+HFGQ+EC+KL+ASP FPEKR+GYL +MLLL E+ +V +
Sbjct:    1 MSLKLRDLIRQVRACKTAAEERAVIAKESAMIRTAIREEQEHYRHRNVAKLLFMHMLG--YPTHFGQLECMKLVASPHFPEKRIGYLGMMLLLSEQADVLM 99

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A425C4M0_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425C4M0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.870e-38
Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 0

Query:    1 MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEV 99
            MSI+LR LI+ VRACKTAAEER+VIAKE ALIRTAFK+ D   R RNVAKLL+IHMLG  YPSHFGQMEC+KLIA+  F EKR+GYL LMLLL +++EV
Sbjct:    1 MSIKLRDLIRNVRACKTAAEERAVIAKESALIRTAFKDNDKQYRHRNVAKLLFIHMLG--YPSHFGQMECLKLIAANNFSEKRIGYLGLMLLLTDQEEV 97

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BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Match: A0A0D2LX33_9CHLO (AP-1 complex subunit gamma-1 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LX33_9CHLO)

HSP 1 Score: 135 bits (339), Expect = 2.940e-38
Identity = 70/100 (70.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query:    2 SIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAKLLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVFL 101
            SIRLR+LI+ VRACKTAAEER VIAKE A +R AFK+ D   R RNVAKL+YIHMLG  YP+HFGQME +KLIA+ GFPEKR+GYL LM+LL E+ EV +
Sbjct:   22 SIRLRELIRAVRACKTAAEERDVIAKESAALREAFKDQDSRYRHRNVAKLMYIHMLG--YPTHFGQMETLKLIAANGFPEKRIGYLGLMILLDERHEVLM 119

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot

BLAST of mRNA_C-tenellus_contig11644.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LGH0_ECTSI	3.810e-45	82.35	AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI...	[more]
A0A061RPQ4_9CHLO	3.060e-41	74.26	Ap-1 complex subunit gamma-2-like n=2 Tax=Tetrasel...	[more]
A0A7S3XHK3_HETAK	5.520e-40	75.25	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7C9DDW2_OPUST	2.010e-39	68.37	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A7S2WL96_9STRA	5.720e-39	77.78	AP-1 complex subunit gamma n=1 Tax=Rhizochromulina...	[more]
A0A482RW17_9ARCH	1.170e-38	72.73	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A1D6LLP5_MAIZE	1.920e-38	66.33	AP-1 complex subunit gamma-1 n=2 Tax=PACMAD clade ...	[more]
K0T3C6_THAOC	2.160e-38	66.34	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A425C4M0_9STRA	2.870e-38	73.74	Adaptin_N domain-containing protein n=1 Tax=Aphano...	[more]
A0A0D2LX33_9CHLO	2.940e-38	70.00	AP-1 complex subunit gamma-1 n=1 Tax=Monoraphidium...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 21..99 e-value: 5.1E-17 score: 61.6
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..102 e-value: 1.8E-34 score: 121.2
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 1..100
None	No IPR available	PANTHER	PTHR22780:SF5	AP-1 COMPLEX SUBUNIT GAMMA	coord: 1..100
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 5..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig11644	contig	C-tenellus_contig11644:3669..5051 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig11644.1.2	mRNA_C-tenellus_contig11644.1.2	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig11644 3669..5051 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig11644.1.2 ID=prot_C-tenellus_contig11644.1.2|Name=mRNA_C-tenellus_contig11644.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=104bp
MSIRLRQLIKKVRACKTAAEERSVIAKECALIRTAFKEGDGPNRARNVAK
LLYIHMLGEWYPSHFGQMECVKLIASPGFPEKRVGYLALMLLLQEKDEVF
LRH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR016024	ARM-type_fold