prot_C-tenellus_contig11618.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig11618.3.1
Unique Nameprot_C-tenellus_contig11618.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length243
Homology
BLAST of mRNA_C-tenellus_contig11618.3.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 6.830e-15
Identity = 67/209 (32.06%), Postives = 101/209 (48.33%), Query Frame = 0
Query:   10 AAEGPGFREACRLFRDEMAALGHAPSAINAVVENVMGEVPRLVKSASGLGGVVGKGSQTGLFE-GSQVQSRDGEGEAVLPDATMAEKEKVVTVDNVGTTVGGLGVDCASIATEAEIED-AEEGVVTRAMLLLPFCRMHDVGGDGGVDALXXXXXXXSEIEAPAAL---SVQVSGLTFSHHRLTYDHRVSATADGIAILDEDGIRILEAG 213
            AA   G+R+ACRLFRDEM ALG+   +++ VVE ++ E    +++ +   G  G G +   F+  + +  R G+ +    +ATM  +  V   D  G               +A++ +  E G+   +   +P       GGDG V             E P  L   +V+ SGLT +  RLTYD R +ATA+ I + D DG+RIL AG
Sbjct: 1619 AAASTGYRQACRLFRDEMGALGYDQGSLDGVVEALL-ETTARIRNPATAAGHEGSGKEAAFFQYPASMPGRSGQAQQ-QQEATMPGRATVEEADAPGE--------------QADVRELVEAGMAVLSDASVPAKGGSGSGGDGAVG------------EEPVLLDIAAVEASGLTLALTRLTYDTRFTATAEAIVVRDSDGVRILSAG 1799          
BLAST of mRNA_C-tenellus_contig11618.3.1 vs. uniprot
Match: A0A6H5KKF1_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF1_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.470e-14
Identity = 68/209 (32.54%), Postives = 102/209 (48.80%), Query Frame = 0
Query:   10 AAEGPGFREACRLFRDEMAALGHAPSAINAVVENVMGEVPRLVK-SASGLGGVVGKGSQTGLFE-GSQVQSRDGEGEAVLPDATMAEKEKVVTVDNVGTTVGGLGVDCASIATEAEIEDAEEGVVTRAMLLLPFCRMHDVGGDGGVDALXXXXXXXSEIEAPAAL---SVQVSGLTFSHHRLTYDHRVSATADGIAILDEDGIRILEAG 213
            AA   G+R+ACRLFRDEM ALG+   +++ VVE ++    R+   +A+   G  G G ++   +  + +  R G+ +    + TM  ++ V   D  G             A   E+ +A   V++ A +  P       GGDG V             E P  L   +V+ SGLT +  RLTYD R++ATA+ I + D DGIR+L AG
Sbjct: 1523 AAASTGYRQACRLFRDEMGALGYDQGSLDGVVEALLETTARIRDPAATAAAGHEGSGKESAFLQYPASMPGRSGQAQQ-QQETTMPGRDTVEEADAPGEP-----------ADVRELVEAGMAVLSDASV--PAEAGRGSGGDGAVG------------EEPVLLDIAAVEASGLTLALTRLTYDTRLTATAEAIIVRDSDGIRVLSAG 1705          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11618.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Y9_ECTSI6.830e-1532.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKF1_9PHAE5.470e-1432.54VPS13 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11618contigC-tenellus_contig11618:2003..3611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11618.3.1mRNA_C-tenellus_contig11618.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig11618 2001..3611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig11618.3.1 ID=prot_C-tenellus_contig11618.3.1|Name=mRNA_C-tenellus_contig11618.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=243bp
LRLAEGGRGAAEGPGFREACRLFRDEMAALGHAPSAINAVVENVMGEVPR
LVKSASGLGGVVGKGSQTGLFEGSQVQSRDGEGEAVLPDATMAEKEKVVT
VDNVGTTVGGLGVDCASIATEAEIEDAEEGVVTRAMLLLPFCRMHDVGGD
GGVDALNSLNSLNSEIEAPAALSVQVSGLTFSHHRLTYDHRVSATADGIA
ILDEDGIRILEAGCVANPSEGGVVDSQRGAATSSGGGGRGGKG
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