prot_C-tenellus_contig116.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig116.1.1
Unique Nameprot_C-tenellus_contig116.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length139
Homology
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BLAST of mRNA_C-tenellus_contig116.1.1 vs. uniprot
Match: A0A6H5KNU9_9PHAE (CRIM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU9_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.020e-33
Identity = 87/138 (63.04%), Postives = 99/138 (71.74%), Query Frame = 0 
Query:    1 MKKVSTGERVNFSDLRR-SVGRIQHGDADSDLA-SEQMLVSELMNTTPSSSYEGDTWRDGYIYNGHDGSPPGSLDGRYDSDIEAADEVVSAAEEVNPKADLIVKEDVPEIKAESGQESLLSMGLAAVKISEEEVVQGG 136
            MKKVSTGER+ F+DLRR SVG  +  DADSD A SEQ  VSELM+TTPSSSYEG+T  DGY YN  D S   S   RY+SD EAADEVV+  +E   KADLIVKEDVPEI  E+ Q SLL+ GLAAV+I   +   GG
Sbjct:   93 MKKVSTGERIKFADLRRRSVGVSR--DADSDAAQSEQRFVSELMDTTPSSSYEGETLGDGYAYNPPDPSVSNSPLARYESDGEAADEVVTDTQEGIGKADLIVKEDVPEIPEETQQGSLLAAGLAAVQIGASQSGLGG 228
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BLAST of mRNA_C-tenellus_contig116.1.1 vs. uniprot
Match: A0A835ZDT3_9STRA (CRIM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT3_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.330e-20
Identity = 63/135 (46.67%), Postives = 84/135 (62.22%), Query Frame = 0 
Query:    1 MKKVSTGERVNFSDLRRSVGRIQHGDADSDLASEQMLVSELMNTTPSSSYEGDTWRDGYIYNGHDGSPPGSLDGRYDSDIEAADEVVSAA--EEVNPKADLIVKEDVPEI--KAESGQESLLSMGLAAVKISEEE 131
            MKK+STGERVN  D+RR + +++    D+ +A EQMLV ELM+TTPSSS+  D WRDGYIY   DG+  G+    Y SD + A+ VVS +   E     DL  K +V ++    +S   SLLS  LAAVK  E++
Sbjct:    1 MKKISTGERVNLQDIRRGIDQLRLSHTDAAIAGEQMLVEELMDTTPSSSFGEDAWRDGYIY---DGAAGGASPKDY-SDDDGAEAVVSGSYPPEGQESQDLFEKVEVAKLPDSQDSNPTSLLSGALAAVKSQEQQ 131
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig116.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNU9_9PHAE2.020e-3363.04CRIM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835ZDT3_9STRA1.330e-2046.67CRIM domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig116contigC-tenellus_contig116:3405..4137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig116.1.1mRNA_C-tenellus_contig116.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig116 3002..7851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig116.1.1 ID=prot_C-tenellus_contig116.1.1|Name=mRNA_C-tenellus_contig116.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=139bp
MKKVSTGERVNFSDLRRSVGRIQHGDADSDLASEQMLVSELMNTTPSSSY
EGDTWRDGYIYNGHDGSPPGSLDGRYDSDIEAADEVVSAAEEVNPKADLI
VKEDVPEIKAESGQESLLSMGLAAVKISEEEVVQGGGG*
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