prot_C-tenellus_contig1158.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig1158.5.1
Unique Nameprot_C-tenellus_contig1158.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length213
Homology
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BLAST of mRNA_C-tenellus_contig1158.5.1 vs. uniprot
Match: D8LH71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH71_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 3.190e-10
Identity = 59/225 (26.22%), Postives = 96/225 (42.67%), Query Frame = 0 
Query:   13 AREIVDFFAFMRCTDEVKTLISRYAQGSDDGFVVVGSNFHRRLQIICVEDSLEQALLTVKSDPENAPGDFDTLLKSFEDL--------------------------VALSCIRAQLREAEGLPHLKELSDISPVRYLETVDQHLPAEPSDTDT--ELEAYNLQKERRNLTDIYADSSRKVSAVKMQSIFMVRSIQSLVSYFSQRTRPLCNVQAKCPQTLCELNRD 209
            A +++   A  +   E + ++SR    SDD  VVVGS+   RL I+ +++ LE ALL       + P  F+ LL+ F+ L                           ALSC  AQ R     P   +   +    Y++ VD+ +P    D D   + E  +  KERRNLTD++ +    VS++K++++     + +        TR L       P+ L   + D
Sbjct:   20 AHDLIHLMAHQKMVVETQHILSRCH--SDDAIVVVGSDVKLRLDILAIDEELENALLNHDQKDPSKP--FERLLERFDILHKSLANTDSAIITERWPQMRAALVRQAALSCFLAQQRN-HARPEPFDWGSVCTKAYIKVVDRLIPQVDFDLDALDDEEQMSASKERRNLTDVFKEKHCSVSSIKLRTLLKENKVGTFEKDMKAFTRALDQALLPRPKLLTMYSND 239
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1158.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH71_ECTSI3.190e-1026.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1158contigC-tenellus_contig1158:7697..8601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1158.5.1mRNA_C-tenellus_contig1158.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig1158 7646..8653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig1158.5.1 ID=prot_C-tenellus_contig1158.5.1|Name=mRNA_C-tenellus_contig1158.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=213bp
MSGPPREISPVNAREIVDFFAFMRCTDEVKTLISRYAQGSDDGFVVVGSN
FHRRLQIICVEDSLEQALLTVKSDPENAPGDFDTLLKSFEDLVALSCIRA
QLREAEGLPHLKELSDISPVRYLETVDQHLPAEPSDTDTELEAYNLQKER
RNLTDIYADSSRKVSAVKMQSIFMVRSIQSLVSYFSQRTRPLCNVQAKCP
QTLCELNRDSWC*
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